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Cytoskeleton Methods and Protocols

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Cover of 'Cytoskeleton Methods and Protocols'

Table of Contents

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    Book Overview
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    Chapter 1 Long-Term Live Cell Imaging of Cell Migration: Effects of Pathogenic Fungi on Human Epithelial Cell Migration.
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    Chapter 2 Live-Cell Imaging of Mitochondria and the Actin Cytoskeleton in Budding Yeast.
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    Chapter 3 Imaging of the Actin Cytoskeleton and Mitochondria in Fixed Budding Yeast Cells.
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    Chapter 4 Imaging of the Cytoskeleton Using Live and Fixed Drosophila Tissue Culture Cells.
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    Chapter 5 Imaging Cytoskeleton Components by Electron Microscopy
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    Chapter 6 Purification and Localization of Intraflagellar Transport Particles and Polypeptides
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    Chapter 7 Fluorescence Imaging of the Cytoskeleton in Plant Roots.
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    Chapter 8 Microtubules in Plant Cells: Strategies and Methods for Immunofluorescence, Transmission Electron Microscopy, and Live Cell Imaging
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    Chapter 9 Basic Methods to Visualize Actin Filaments In Vitro Using Fluorescence Microscopy for Observation of Filament Severing and Bundling
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    Chapter 10 An In Vitro Model System to Test Mechano-microbiological Interactions Between Bacteria and Host Cells
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    Chapter 11 Reconstitution of a Minimal Actin Cortex by Coupling Actin Filaments to Reconstituted Membranes.
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    Chapter 12 Use of Nanobodies to Localize Endogenous Cytoskeletal Proteins and to Determine Their Contribution to Cancer Cell Invasion by Using an ECM Degradation Assay
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    Chapter 13 Actin-Dynamics in Plant Cells: The Function of Actin-Perturbing Substances: Jasplakinolide, Chondramides, Phalloidin, Cytochalasins, and Latrunculins.
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    Chapter 14 Quantitative Motion Analysis in Two and Three Dimensions
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    Chapter 15 Measurement of Cell Motility Using Microgrooved Substrates
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    Chapter 16 The Study of Cell Motility by Cell Traction Force Microscopy (CTFM)
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    Chapter 17 Melanosome Motility in Fish Retinal Pigment Epithelial (RPE) Cells
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    Chapter 18 Analysis of Stem Cell Motility In Vivo Based on Immunodetection of Planarian Neoblasts and Tracing of BrdU-Labeled Cells After Partial Irradiation.
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    Chapter 19 Chemotaxis: Under Agarose Assay
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    Chapter 20 Functional Analysis of Actin-Binding Proteins in the Central Nervous System of Drosophila.
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    Chapter 21 Cytoskeleton Methods and Protocols
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    Chapter 22 Using a Handheld Gene Gun for Genetic Transformation of Tetrahymena thermophila
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    Chapter 23 Proteomic Tools for the Analysis of Cytoskeleton Proteins.
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    Chapter 24 Homology Modeling Procedures for Cytoskeletal Proteins of Tetrahymena and Other Ciliated Protists.
Attention for Chapter 5: Imaging Cytoskeleton Components by Electron Microscopy
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Chapter title
Imaging Cytoskeleton Components by Electron Microscopy
Chapter number 5
Book title
Cytoskeleton Methods and Protocols
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-3124-8_5
Pubmed ID
Book ISBNs
978-1-4939-3123-1, 978-1-4939-3124-8
Authors

Tatyana Svitkina

Abstract

The cytoskeleton is a complex of detergent-insoluble components of the cytoplasm playing critical roles in cell motility, shape generation, and mechanical properties of a cell. Fibrillar polymers-actin filaments, microtubules, and intermediate filaments-are major constituents of the cytoskeleton, which constantly change their organization during cellular activities. The actin cytoskeleton is especially polymorphic, as actin filaments can form multiple higher order assemblies performing different functions. Structural information about cytoskeleton organization is critical for understanding its functions and mechanisms underlying various forms of cellular activity. Because of the nanometer-scale thickness of cytoskeletal fibers, electron microscopy (EM) is a key tool to determine the structure of the cytoskeleton.This article describes application of rotary shadowing (or metal replica) EM for visualization of the cytoskeleton. The procedure is applicable to thin cultured cells growing on glass coverslips and consists of detergent extraction of cells to expose their cytoskeleton, chemical fixation to provide stability, ethanol dehydration and critical point drying to preserve three-dimensionality, rotary shadowing with platinum to create contrast, and carbon coating to stabilize replicas. This technique provides easily interpretable three-dimensional images, in which individual cytoskeletal fibers are clearly resolved, and individual proteins can be identified by immunogold labeling. More importantly, replica EM is easily compatible with live cell imaging, so that one can correlate the dynamics of a cell or its components, e.g., expressed fluorescent proteins, with high resolution structural organization of the cytoskeleton in the same cell.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 29 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 29 100%

Demographic breakdown

Readers by professional status Count As %
Student > Bachelor 6 21%
Student > Ph. D. Student 5 17%
Student > Master 3 10%
Researcher 3 10%
Professor 2 7%
Other 4 14%
Unknown 6 21%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 9 31%
Agricultural and Biological Sciences 5 17%
Immunology and Microbiology 2 7%
Nursing and Health Professions 1 3%
Veterinary Science and Veterinary Medicine 1 3%
Other 4 14%
Unknown 7 24%