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Drug Target miRNA

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Cover of 'Drug Target miRNA'

Table of Contents

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    Book Overview
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    Chapter 1 miRNA Targeting Drugs: The Next Blockbusters?
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    Chapter 2 Functional Analysis of miRNAs Using the DIANA Tools Online Suite.
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    Chapter 3 Non-nucleotide Modification of Anti-miRNA Oligonucleotides.
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    Chapter 4 Quantification of Oligonucleotide Association with miRNA-Argonaute Complexes In Vitro.
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    Chapter 5 Determination of Anti-miR Association with miRNA/Argonaute Complexes In Vivo.
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    Chapter 6 Competitive Argonaute-Based RNA Immunoprecipitation for Investigation of Transcriptomic Response to Anti-miR.
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    Chapter 7 Assessing Anti-miR Pharmacology with miRNA Polysome Shift Assay.
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    Chapter 8 Evaluating Synergistic Effects of miR-34a Mimics in Combination with Other Therapeutic Agents in Cultured Non-Small Cell Lung Cancer Cells.
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    Chapter 9 Assessing the Off-Target Effects of miRNA Inhibitors on Innate Immune Toll-Like Receptors.
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    Chapter 10 Design of Multimodal Small Molecules Targeting miRNAs Biogenesis: Synthesis and In Vitro Evaluation.
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    Chapter 11 Machine Learning Approaches Toward Building Predictive Models for Small Molecule Modulators of miRNA and Its Utility in Virtual Screening of Molecular Databases.
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    Chapter 12 Identification of Small Molecule Modulators of MicroRNA by Library Screening.
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    Chapter 13 Rapid Generation of miRNA Inhibitor Leads by Bioinformatics and Efficient High-Throughput Screening Methods.
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    Chapter 14 Drug Target miRNA
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    Chapter 15 Small Molecules Targeting the miRNA-Binding Domain of Argonaute 2: From Computer-Aided Molecular Design to RNA Immunoprecipitation.
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    Chapter 16 Surface Plasmon Resonance: A Useful Strategy for the Identification of Small Molecule Argonaute 2 Protein Binders.
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    Chapter 17 Antagonists of the miRNA-Argonaute 2 Protein Complex: Anti-miR-AGOs.
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    Chapter 18 Elucidating Mechanisms of Molecular Recognition Between Human Argonaute and miRNA Using Computational Approaches.
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    Chapter 19 Kinetic Analysis of Target RNA Binding and Slicing by Human Argonaute 2 Protein.
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    Chapter 20 Site-Specific Fluorescent Labeling of Argonaute for FRET-Based Bio-Assays.
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    Chapter 21 Single-Molecule Fluorescence Energy Transfer Assays for the Characterization of Reaction Pathways of miRNA-Argonaute Complex.
Attention for Chapter 11: Machine Learning Approaches Toward Building Predictive Models for Small Molecule Modulators of miRNA and Its Utility in Virtual Screening of Molecular Databases.
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Chapter title
Machine Learning Approaches Toward Building Predictive Models for Small Molecule Modulators of miRNA and Its Utility in Virtual Screening of Molecular Databases.
Chapter number 11
Book title
Drug Target miRNA
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-6563-2_11
Pubmed ID
Book ISBNs
978-1-4939-6561-8, 978-1-4939-6563-2
Authors

Vinita Periwal, Vinod Scaria

Editors

Marco F. Schmidt

Abstract

The ubiquitous role of microRNAs (miRNAs) in a number of pathological processes has suggested that they could act as potential drug targets. RNA-binding small molecules offer an attractive means for modulating miRNA function. The availability of bioassay data sets for a variety of biological assays and molecules in public domain provides a new opportunity toward utilizing them to create models and further utilize them for in silico virtual screening approaches to prioritize or assign potential functions for small molecules. Here, we describe a computational strategy based on machine learning for creation of predictive models from high-throughput biological screens for virtual screening of small molecules with the potential to inhibit microRNAs. Such models could be potentially used for computational prioritization of small molecules before performing high-throughput biological assay.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 17 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 17 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 3 18%
Student > Postgraduate 2 12%
Student > Bachelor 2 12%
Lecturer > Senior Lecturer 1 6%
Other 1 6%
Other 2 12%
Unknown 6 35%
Readers by discipline Count As %
Agricultural and Biological Sciences 2 12%
Medicine and Dentistry 2 12%
Computer Science 1 6%
Chemistry 1 6%
Engineering 1 6%
Other 0 0%
Unknown 10 59%