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Programmed Necrosis

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Cover of 'Programmed Necrosis'

Table of Contents

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    Book Overview
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    Chapter 1 Tools in the Art of Studying Necroptosis
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    Chapter 2 Loss-of-Function RNAi Screen to Identify Necrosis-Signaling Molecules
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    Chapter 3 Chemical Library Screens to Identify Pharmacological Modulators of Necroptosis
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    Chapter 4 Distinguishing Necroptosis from Apoptosis
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    Chapter 5 Methods for Studying TNF-Mediated Necroptosis in Cultured Cells
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    Chapter 6 Analysis of Necroptosis in Bone Marrow-Derived Macrophages
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    Chapter 7 Generation and Use of Chimeric RIP Kinase Molecules to Study Necroptosis
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    Chapter 8 Detection of MLKL Oligomerization During Programmed Necrosis
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    Chapter 9 Analysis of Cytokine- and Influenza A Virus-Driven RIPK3 Necrosome Formation
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    Chapter 10 Detection of RIPK1 in the FADD-Containing Death Inducing Signaling Complex (DISC) During Necroptosis
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    Chapter 11 Use of RIP1 Kinase Small-Molecule Inhibitors in Studying Necroptosis
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    Chapter 12 Analyzing Necroptosis Using an RIPK1 Kinase Inactive Mouse Model of TNF Shock
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    Chapter 13 Assessment of In Vivo Kidney Cell Death: Acute Kidney Injury
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    Chapter 14 Assessment of In Vivo Kidney Cell Death: Glomerular Injury
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    Chapter 15 Detection of Necroptosis by Phospho-RIPK3 Immunohistochemical Labeling
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    Chapter 16 Characterization of the TNFR1-SC Using “Modified Tandem Affinity Purification” in Conjunction with Liquid Chromatography–Mass Spectrometry (LC-MS)
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    Chapter 17 Monitoring RIPK1 Phosphorylation in the TNFR1 Signaling Complex
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    Chapter 18 Analysis of CYLD Proteolysis by CASPASE 8 in Bone Marrow-Derived Macrophages
Attention for Chapter 7: Generation and Use of Chimeric RIP Kinase Molecules to Study Necroptosis
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Chapter title
Generation and Use of Chimeric RIP Kinase Molecules to Study Necroptosis
Chapter number 7
Book title
Programmed Necrosis
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-8754-2_7
Pubmed ID
Book ISBNs
978-1-4939-8753-5, 978-1-4939-8754-2
Authors

Diego A. Rodriguez, Douglas R. Green

Abstract

Necroptosis, a form of regulated necrosis, is triggered by a variety of signals that converge to activate receptor interacting protein kinase-3 (RIPK3), consequently promoting the direct phosphorylation and activation of the mixed lineage kinase like (MLKL) protein. Active MLKL executes necroptosis by disrupting the integrity of the plasma membrane. Stimuli that can induce necroptosis include ligation of death receptors (a subset of the TNFR family), toll-like receptors (in particular, TLR3 and TLR4), interferons, and the intracellular viral sensor, DAI/ZBP1, among others. To study the process in more detail, it is useful to have a means to directly activate RIPK3. Here we provide protocols and procedures to artificially induce necroptotic cell death by drug-induced forced dimerization of RIPK3. We also provide information on specific kinase inhibitors, procedures to monitor RIPK3 and MLKL activation, and real-time quantification of cell death.