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Whole Genome Amplification

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Cover of 'Whole Genome Amplification'

Table of Contents

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    Book Overview
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    Chapter 1 Principles of Whole-Genome Amplification
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    Chapter 2 Bias in Whole Genome Amplification: Causes and Considerations.
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    Chapter 3 The Single-Cell Lab or How to Perform Single-Cell Molecular Analysis
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    Chapter 4 Sample Preparation Methods Following CellSearch Approach Compatible of Single-Cell Whole-Genome Amplification: An Overview
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    Chapter 5 Deterministic Whole-Genome Amplification of Single Cells.
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    Chapter 6 Construction of a DNA Library on Microbeads Using Whole Genome Amplification
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    Chapter 7 Heat-Induced Fragmentation and Adapter-Assisted Whole Genome Amplification Using GenomePlex ® Single-Cell Whole Genome Amplification Kit (WGA4)
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    Chapter 8 Whole Genome Amplification by Isothermal Multiple Strand Displacement Using Phi29 DNA Polymerase.
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    Chapter 9 Using Multiplex PCR for Assessing the Quality of Whole Genome Amplified DNA
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    Chapter 10 Quality Control of Isothermal Amplified DNA Based on Short Tandem Repeat Analysis
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    Chapter 11 Laser Microdissection of FFPE Tissue Areas and Subsequent Whole Genome Amplification by Ampli 1™
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    Chapter 12 Whole Genome Amplification from Blood Spot Samples
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    Chapter 13 Analysis of Whole Mitogenomes from Ancient Samples
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    Chapter 14 Copy Number Variation Analysis by Array Analysis of Single Cells Following Whole Genome Amplification.
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    Chapter 15 Whole Genome Amplification in Genomic Analysis of Single Circulating Tumor Cells.
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    Chapter 16 Whole Genome Amplification of Labeled Viable Single Cells Suited for Array-Comparative Genomic Hybridization
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    Chapter 17 Low-Volume On-Chip Single-Cell Whole Genome Amplification for Multiple Subsequent Analyses.
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    Chapter 18 Detection and Characterization of Circulating Tumor Cells by the CellSearch Approach
Attention for Chapter 7: Heat-Induced Fragmentation and Adapter-Assisted Whole Genome Amplification Using GenomePlex ® Single-Cell Whole Genome Amplification Kit (WGA4)
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Chapter title
Heat-Induced Fragmentation and Adapter-Assisted Whole Genome Amplification Using GenomePlex ® Single-Cell Whole Genome Amplification Kit (WGA4)
Chapter number 7
Book title
Whole Genome Amplification
Published in
Methods in molecular biology, January 2015
DOI 10.1007/978-1-4939-2990-0_7
Pubmed ID
Book ISBNs
978-1-4939-2989-4, 978-1-4939-2990-0
Authors

Amin El-Heliebi, Shukun Chen, Thomas Kroneis, El-Heliebi, Amin, Chen, Shukun, Kroneis, Thomas

Abstract

Whole genome amplification (WGA) is a widely used technique allowing multiplying picogram amounts of target DNA by several orders of magnitude. The technique described here is based on heat-induced random fragmentation yielding DNA strands mainly ranging from 0.1 to 1 kb in length. The fragmented DNA is then subjected to library generation by annealing of adaptor sequences to both ends of the DNA fragments. Using primers hybridizing to the adapter sequences, the DNA is amplified by thermal cycling. This amplification typically yields > 2 mg DNA from a single cell, is suited for amplifying DNA isolated from (partly) degraded samples [e.g. formalin-fixed paraffin-embedded (FFPE) material] and works well when used for array-comparative genome hybridization (array-CGH).

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 5 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 20%
Unknown 4 80%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 3 60%
Researcher 1 20%
Unknown 1 20%
Readers by discipline Count As %
Agricultural and Biological Sciences 3 60%
Biochemistry, Genetics and Molecular Biology 1 20%
Unknown 1 20%