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Alpha-1 Antitrypsin Deficiency

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Cover of 'Alpha-1 Antitrypsin Deficiency'

Table of Contents

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    Book Overview
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    Chapter 1 Pathophysiology of Alpha-1 Antitrypsin Deficiency Liver Disease
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    Chapter 2 Pathophysiology of Alpha-1 Antitrypsin Lung Disease
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    Chapter 3 Measuring and Interpreting Serum AAT Concentration
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    Chapter 4 AAT Phenotype Identification by Isoelectric Focusing
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    Chapter 5 Laboratory Diagnosis by Genotyping
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    Chapter 6 Genotyping Protocol for the Alpha-1 Antitrypsin (PiZ) Mouse Model
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    Chapter 7 Elastase-Induced Lung Emphysema Models in Mice
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    Chapter 8 Assessing Structure–Function Relations in Mice Using the Forced Oscillation Technique and Quantitative Histology
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    Chapter 9 Practical Methods for Assessing Emphysema Severity Based on Estimation of Linear Mean Intercept (Lm) in the Context of Animal Models of Alpha-1 Antitrypsin Deficiency
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    Chapter 10 Design, Cloning, and In Vitro Screening of Artificial miRNAs to Silence Alpha-1 Antitrypsin
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    Chapter 11 Methods to Identify and Characterize siRNAs Targeting Serpin A1 In Vitro and In Vivo Using RNA Interference
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    Chapter 12 Knockdown of Z Mutant Alpha-1 Antitrypsin In Vivo Using Modified DNA Antisense Oligonucleotides
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    Chapter 13 Immunohistochemistry Staining for Human Alpha-1 Antitrypsin
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    Chapter 14 Periodic Acid-Schiff Staining with Diastase
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    Chapter 15 Protocol for Directed Differentiation of Human Induced Pluripotent Stem Cells (iPSCs) to a Hepatic Lineage
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    Chapter 16 Isolation of Kupffer Cells and Hepatocytes from a Single Mouse Liver
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    Chapter 17 Alpha-1 Antitrypsin Transcytosis and Secretion
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    Chapter 18 Measuring the Effect of Histone Deacetylase Inhibitors (HDACi) on the Secretion and Activity of Alpha-1 Antitrypsin
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    Chapter 19 Expression and Purification of Active Recombinant Human Alpha-1 Antitrypsin (AAT) from Escherichia coli
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    Chapter 20 Quantification of Total Human Alpha-1 Antitrypsin by Sandwich ELISA
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    Chapter 21 Quantification of Murine AAT by Direct ELISA
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    Chapter 22 Quantification of Z-AAT by a Z-Specific “Sandwich” ELISA
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    Chapter 23 Semiquantitation of Monomer and Polymer Alpha-1 Antitrypsin by Centrifugal Separation and Assay by Western Blot of Soluble and Insoluble Components
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    Chapter 24 Electrophoresis- and FRET-Based Measures of Serpin Polymerization
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    Chapter 25 Therapeutics: Alpha-1 Antitrypsin Augmentation Therapy
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    Chapter 26 Therapeutic Options in Alpha-1 Antitrypsin Deficiency: Liver Transplantation
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    Chapter 27 Therapeutics: Gene Therapy for Alpha-1 Antitrypsin Deficiency
Attention for Chapter 23: Semiquantitation of Monomer and Polymer Alpha-1 Antitrypsin by Centrifugal Separation and Assay by Western Blot of Soluble and Insoluble Components
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Chapter title
Semiquantitation of Monomer and Polymer Alpha-1 Antitrypsin by Centrifugal Separation and Assay by Western Blot of Soluble and Insoluble Components
Chapter number 23
Book title
Alpha-1 Antitrypsin Deficiency
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-7163-3_23
Pubmed ID
Book ISBNs
978-1-4939-7161-9, 978-1-4939-7163-3
Authors

Keith S. Blomenkamp, Jeffrey H. Teckman

Abstract

Alpha-1 antitrypsin (a1AT) deficiency, in its classical form, is an autosomal recessive disease associated with an increased risk of liver disease in adults and children, and with lung disease in adults. The vast majority of liver disease is associated with homozygosity for the Z mutant allele, also called PiZZ. This homozygous allele synthesizes large quantities of a1AT mutant Z protein in the liver, but the mutant protein also folds improperly during biogenesis. As a result, approximately 85% of the molecules are retained within the hepatocytes instead of being appropriately secreted. The resulting low, or "deficient," serum level leaves the lungs vulnerable to inflammatory injury from uninhibited neutrophil proteases. Most of the mutant Z protein retained within hepatocytes is directed into intracellular proteolysis pathways, but some molecules remain in the endoplasmic reticulum for long periods of time and others adopt an unusual aggregated or "polymerized" conformation. It is thought that these intracellular polymers trigger a cascade of intracellular injury which can lead to end organ liver injury including chronic hepatitis, cirrhosis, and hepatocellular carcinoma. It is widely accepted that the disease causing factor in mutant Z-alpha-1 antitrypsin deficiency (AATD-Z) is the toxic build-up of the mutant Z protein. Since misfolding of some but not all of the Z protein during its maturation leads to homopolymerization, an assay to assess the amount of normally folded ATZ and accumulated polymeric ATZ would be very useful. Here we describe a method to semiquantitatively assess these two fractions in a tissue or cell culture source.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 12 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 12 100%

Demographic breakdown

Readers by professional status Count As %
Professor 1 8%
Student > Ph. D. Student 1 8%
Student > Bachelor 1 8%
Student > Master 1 8%
Unknown 8 67%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 2 17%
Agricultural and Biological Sciences 2 17%
Unknown 8 67%