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Proteomic Profiling

Overview of attention for book
Cover of 'Proteomic Profiling'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Mechanical/Physical Methods of Cell Distribution and Tissue Homogenization
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    Chapter 2 Sample Preservation Through Heat Stabilization of Proteins: Principles and Examples
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    Chapter 3 Isolating Peripheral Lymphocytes by Density Gradient Centrifugation and Magnetic Cell Sorting
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    Chapter 4 Investigating the Adipose Tissue Secretome: A Protocol to Generate High-Quality Samples Appropriate for Comprehensive Proteomic Profiling
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    Chapter 5 Methods for proteomics-based analysis of the human muscle secretome using an in vitro exercise model.
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    Chapter 6 Urinary Pellet Sample Preparation for Shotgun Proteomic Analysis of Microbial Infection and Host–Pathogen Interactions
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    Chapter 7 A Protocol for the Parallel Isolation of Intact Mitochondria from Rat Liver, Kidney, Heart, and Brain
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    Chapter 8 Isolation of Mitochondria from Cultured Cells and Liver Tissue Biopsies for Molecular and Biochemical Analyses
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    Chapter 9 Dynamic Range Compression with ProteoMiner™: Principles and Examples
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    Chapter 10 Qualitative and Quantitative Proteomic Analysis of Formalin-Fixed Paraffin-Embedded (FFPE) Tissue
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    Chapter 11 Full-Length Protein Extraction Protocols and Gel-Based Downstream Applications in Formalin-Fixed Tissue Proteomics
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    Chapter 12 Enrichment of Low-Abundant Protein Targets by Immunoprecipitation Upstream of Mass Spectrometry
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    Chapter 13 Principles of Protein Labeling Techniques
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    Chapter 14 Isolation of extracellular vesicles for proteomic profiling.
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    Chapter 15 A Protocol for Exosome Isolation and Characterization: Evaluation of Ultracentrifugation, Density-Gradient Separation, and Immunoaffinity Capture Methods
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    Chapter 16 Chloroplast Isolation and Affinity Chromatography for Enrichment of Low-Abundant Proteins in Complex Proteomes
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    Chapter 17 Depletion of RuBisCO Protein Using the Protamine Sulfate Precipitation Method
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    Chapter 18 Step-by-Step Preparation of Proteins for Mass Spectrometric Analysis
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    Chapter 19 Identification of Protein N-Termini Using TMPP or Dimethyl Labeling and Mass Spectrometry
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    Chapter 20 Optimization of Cell Lysis and Protein Digestion Protocols for Protein Analysis by LC-MS/MS
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    Chapter 21 Comprehensive Protocol to Simultaneously Study Protein Phosphorylation, Acetylation, and N-Linked Sialylated Glycosylation
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    Chapter 22 Protein Profiling and Phosphoprotein Analysis by Isoelectric Focusing
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    Chapter 23 Principles and Examples of Gel-Based Approaches for Phosphoprotein Analysis
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    Chapter 24 Neutral Phosphate-Affinity SDS-PAGE System for Profiling of Protein Phosphorylation
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    Chapter 25 Proteomic Profiling
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    Chapter 26 In-Gel Peptide IEF Sample Preparation for LC/MS Analysis
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    Chapter 27 Proteomic Profiling
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    Chapter 28 2-D Western Blotting for Evaluation of Antibodies Developed for Detection of Host Cell Protein
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    Chapter 29 Free Flow Electrophoresis for Separation of Native Membrane Protein Complexes
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    Chapter 30 Three-Dimensional Electrophoresis for Quantitative Profiling of Complex Proteomes
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    Chapter 31 A Bead-Based Multiplex Sandwich Immunoassay to Assess the Abundance and Posttranslational Modification State of β-Catenin
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    Chapter 32 Identification of SUMO E3 Ligase-Specific Substrates Using the HuProt Human Proteome Microarray.
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    Chapter 33 Amyloid-binding proteins: affinity-based separation, proteomic identification, and optical biosensor validation.
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    Chapter 34 Proteomic profiling by nanomaterials-based matrix-assisted laser desorption/ionization mass spectrometry for high-resolution data and novel protein information directly from biological samples.
Attention for Chapter 33: Amyloid-binding proteins: affinity-based separation, proteomic identification, and optical biosensor validation.
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (82nd percentile)
  • High Attention Score compared to outputs of the same age and source (90th percentile)

Mentioned by

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1 news outlet

Citations

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Readers on

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13 Mendeley
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Chapter title
Amyloid-binding proteins: affinity-based separation, proteomic identification, and optical biosensor validation.
Chapter number 33
Book title
Proteomic Profiling
Published in
Methods in molecular biology, January 2015
DOI 10.1007/978-1-4939-2550-6_33
Pubmed ID
Book ISBNs
978-1-4939-2549-0, 978-1-4939-2550-6
Authors

Medvedev, Alexei, Buneeva, Olga, Kopylov, Arthur, Gnedenko, Oksana, Ivanov, Alexis, Zgoda, Victor, Makarov, Alexander A, Alexei Medvedev, Olga Buneeva, Arthur Kopylov, Oksana Gnedenko, Alexis Ivanov, Victor Zgoda, Alexander A. Makarov

Abstract

The amyloid-beta peptide is considered as a key player in the development and progression of Alzheimer's disease (AD). Although good evidence exists that amyloid-beta accumulates inside cells, intracellular brain amyloid-beta-binding proteins remain poorly characterized. Here we describe a protocol for affinity-based profiling of amyloid-beta-binding proteins of rat brain, their proteomic identification and validation by a surface plasmon resonance (SPR)-based analysis. It includes: (a) SPR-based selection of immobilization conditions for beta-amyloid coupling and choice of appropriate resin for preparation of an affinity sorbent; (b) immobilization of beta-amyloid on the selected resin;

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 13 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 13 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 3 23%
Student > Bachelor 2 15%
Student > Master 1 8%
Unknown 7 54%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 3 23%
Agricultural and Biological Sciences 1 8%
Medicine and Dentistry 1 8%
Unknown 8 62%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 7. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 11 April 2015.
All research outputs
#4,172,844
of 22,799,071 outputs
Outputs from Methods in molecular biology
#1,130
of 13,118 outputs
Outputs of similar age
#59,330
of 353,063 outputs
Outputs of similar age from Methods in molecular biology
#90
of 996 outputs
Altmetric has tracked 22,799,071 research outputs across all sources so far. Compared to these this one has done well and is in the 80th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 13,118 research outputs from this source. They receive a mean Attention Score of 3.3. This one has done particularly well, scoring higher than 90% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 353,063 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 82% of its contemporaries.
We're also able to compare this research output to 996 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 90% of its contemporaries.