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Root Development

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Cover of 'Root Development'

Table of Contents

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    Book Overview
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    Chapter 1 Measuring Plant Root Traits Under Controlled and Field Conditions: Step-by-Step Procedures
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    Chapter 2 Phenotyping Crop Root Crowns: General Guidance and Specific Protocols for Maize, Wheat, and Soybean
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    Chapter 3 Developmental Analysis of Arabidopsis Root Meristem
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    Chapter 4 Genetic and Phenotypic Analysis of Lateral Root Development in Arabidopsis thaliana
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    Chapter 5 Adapting the Lateral Root-Inducible System to Medicago truncatula
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    Chapter 6 Characterization of Root Epidermal Cell Patterning and Differentiation in Arabidopsis
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    Chapter 7 In Vitro Assay for Induction of Adventitious Rooting on Intact Arabidopsis Hypocotyls
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    Chapter 8 Root Gravitropism: Quantification, Challenges, and Solutions
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    Chapter 9 Calcium Ion Dynamics in Roots: Imaging and Analysis
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    Chapter 10 Optimized Whole-Mount In Situ Immunolocalization for Arabidopsis thaliana Root Meristems and Lateral Root Primordia
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    Chapter 11 Light Sheet Fluorescence Microscopy Optimized for Long-Term Imaging of Arabidopsis Root Development
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    Chapter 12 Histological Profiling Over Time to Optimize Root Cell Type-Specific Reporter Lines for Cell Sorting
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    Chapter 13 Long-Term In Vivo Imaging of Luciferase-Based Reporter Gene Expression in Arabidopsis Roots
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    Chapter 14 Cortical Cell Length Analysis During Gravitropic Root Growth
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    Chapter 15 Growth Rate Normalization Method to Assess Gravitropic Root Growth
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    Chapter 16 Immunoprecipitation of Membrane Proteins from Arabidopsis thaliana Root Tissue
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    Chapter 17 Monitoring Transcriptomic Changes in Soil-Grown Roots and Shoots of Arabidopsis thaliana Subjected to a Progressive Drought Stress
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    Chapter 18 Chromatin Immunoprecipitation Sequencing (ChIP-Seq) for Transcription Factors and Chromatin Factors in Arabidopsis thaliana Roots: From Material Collection to Data Analysis
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    Chapter 19 μChIP-Seq for Genome-Wide Mapping of In Vivo TF-DNA Interactions in Arabidopsis Root Protoplasts
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    Chapter 20 Proteome Analysis of Arabidopsis Roots
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    Chapter 21 Step-by-Step Construction of Gene Co-expression Networks from High-Throughput Arabidopsis RNA Sequencing Data
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    Chapter 22 GWA-Portal: Genome-Wide Association Studies Made Easy
Attention for Chapter 7: In Vitro Assay for Induction of Adventitious Rooting on Intact Arabidopsis Hypocotyls
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Chapter title
In Vitro Assay for Induction of Adventitious Rooting on Intact Arabidopsis Hypocotyls
Chapter number 7
Book title
Root Development
Published in
Methods in molecular biology, March 2018
DOI 10.1007/978-1-4939-7747-5_7
Pubmed ID
Book ISBNs
978-1-4939-7746-8, 978-1-4939-7747-5
Authors

Hoang Khai Trinh, Inge Verstraeten, Danny Geelen

Abstract

Adventitious roots (AR) are de novo formed roots that emerge from any part of the plant or from callus in tissue culture, except root tissue. The plant tissue origin and the method by which they are induced determine the physiological properties of emerged ARs. Hence, a standard method encompassing all types of AR does not exist. Here we describe a method for the induction and analysis of AR that emerge from the etiolated hypocotyl of dicot plants. The hypocotyl is formed during embryogenesis and shows a determined developmental pattern which usually does not involve AR formation. However, the hypocotyl shows propensity to form de novo roots under specific circumstances such as removal of the root system, high humidity or flooding, or during de-etiolation. The hypocotyl AR emerge from a pericycle-like cell layer surrounding the vascular tissue of the central cylinder, which is reminiscent to the developmental program of lateral roots. Here we propose an easy protocol for in vitro hypocotyl AR induction from etiolated Arabidopsis seedlings.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 13 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 13 100%

Demographic breakdown

Readers by professional status Count As %
Student > Master 3 23%
Researcher 2 15%
Other 1 8%
Student > Bachelor 1 8%
Unknown 6 46%
Readers by discipline Count As %
Agricultural and Biological Sciences 5 38%
Biochemistry, Genetics and Molecular Biology 2 15%
Unknown 6 46%