Chapter title |
Structure-Based Virtual Screening
|
---|---|
Chapter number | 5 |
Book title |
Protein Bioinformatics
|
Published in |
Methods in molecular biology, February 2017
|
DOI | 10.1007/978-1-4939-6783-4_5 |
Pubmed ID | |
Book ISBNs |
978-1-4939-6781-0, 978-1-4939-6783-4
|
Authors |
Qingliang Li, Salim Shah |
Editors |
Cathy H. Wu, Cecilia N. Arighi, Karen E. Ross |
Abstract |
Structure-based virtual screening (SBVS) is a computational approach used in the early-stage drug discovery campaign to search a chemical compound library for novel bioactive molecules against a certain drug target. It utilizes the three-dimensional (3D) structure of the biological target, obtained from X-ray, NMR, or computational modeling, to dock a collection of chemical compounds into the binding site and select a subset of these compounds based on the predicted binding scores for further biological evaluation. In the present work, we illustrate the basic process of conducting a SBVS with examples using freely accessible tools and resources. |
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Geographical breakdown
Country | Count | As % |
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Unknown | 122 | 100% |
Demographic breakdown
Readers by professional status | Count | As % |
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Student > Bachelor | 17 | 14% |
Student > Ph. D. Student | 15 | 12% |
Student > Master | 14 | 11% |
Researcher | 10 | 8% |
Student > Doctoral Student | 4 | 3% |
Other | 13 | 11% |
Unknown | 49 | 40% |
Readers by discipline | Count | As % |
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Chemistry | 14 | 11% |
Pharmacology, Toxicology and Pharmaceutical Science | 12 | 10% |
Computer Science | 7 | 6% |
Agricultural and Biological Sciences | 6 | 5% |
Other | 10 | 8% |
Unknown | 53 | 43% |