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Protein Bioinformatics

Overview of attention for book
Cover of 'Protein Bioinformatics'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Protein Bioinformatics Databases and Resources
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    Chapter 2 UniProt Protein Knowledgebase
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    Chapter 3 Tutorial on Protein Ontology Resources
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    Chapter 4 CATH-Gene3D: Generation of the Resource and Its Use in Obtaining Structural and Functional Annotations for Protein Sequences
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    Chapter 5 Structure-Based Virtual Screening
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    Chapter 6 Bioinformatics Analysis of Protein Phosphorylation in Plant Systems Biology Using P3DB
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    Chapter 7 Navigating the Glycome Space and Connecting the Glycoproteome
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    Chapter 8 Impact of Nonsynonymous Single-Nucleotide Variations on Post-Translational Modification Sites in Human Proteins
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    Chapter 9 Analysis of Cysteine Redox Post-Translational Modifications in Cell Biology and Drug Pharmacology
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    Chapter 10 Analysis of Protein Phosphorylation and Its Functional Impact on Protein–Protein Interactions via Text Mining of the Scientific Literature
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    Chapter 11 Functional Interaction Network Construction and Analysis for Disease Discovery
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    Chapter 12 Prediction of Protein Interactions by Structural Matching: Prediction of PPI Networks and the Effects of Mutations on PPIs that Combines Sequence and Structural Information
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    Chapter 13 NDEx: A Community Resource for Sharing and Publishing of Biological Networks
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    Chapter 14 Bioinformatics Analysis of Functional Associations of PTMs
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    Chapter 15 Bioinformatics Analysis of PTM-Modified Protein Interaction Networks and Complexes
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    Chapter 16 iPTMnet: Integrative Bioinformatics for Studying PTM Networks
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    Chapter 17 Protein Identification from Tandem Mass Spectra by Database Searching
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    Chapter 18 Bioinformatics Analysis of Top-Down Mass Spectrometry Data with ProSight Lite
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    Chapter 19 Mapping Biological Networks from Quantitative Data-Independent Acquisition Mass Spectrometry: Data to Knowledge Pipelines
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    Chapter 20 Annotation of Alternatively Spliced Proteins and Transcripts with Protein-Folding Algorithms and Isoform-Level Functional Networks
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    Chapter 21 Computational and Statistical Methods for High-Throughput Mass Spectrometry-Based PTM Analysis
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    Chapter 22 Cross-Species PTM Mapping from Phosphoproteomic Data
Attention for Chapter 2: UniProt Protein Knowledgebase
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Chapter title
UniProt Protein Knowledgebase
Chapter number 2
Book title
Protein Bioinformatics
Published in
Methods in molecular biology, February 2017
DOI 10.1007/978-1-4939-6783-4_2
Pubmed ID
Book ISBNs
978-1-4939-6781-0, 978-1-4939-6783-4

Sangya Pundir, Maria J. Martin, Claire O’Donovan


Cathy H. Wu, Cecilia N. Arighi, Karen E. Ross


The Universal Protein Resource (UniProt) is a freely available comprehensive resource for protein sequence and annotation data. UniProt is a collaboration between the European Bioinformatics Institute (EMBL-EBI), the Swiss Institute of Bioinformatics (SIB), and the Protein Information Resource (PIR). Across the three institutes more than 100 people are involved through different tasks such as expert curation, software development, and support.This chapter introduces the functionality and data provided by UniProt. It describes example use cases for which you might come to UniProt and the methods to help you achieve your goals.

X Demographics

X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 157 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 157 100%

Demographic breakdown

Readers by professional status Count As %
Student > Bachelor 26 17%
Student > Ph. D. Student 25 16%
Student > Master 19 12%
Researcher 16 10%
Professor 6 4%
Other 26 17%
Unknown 39 25%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 44 28%
Agricultural and Biological Sciences 18 11%
Computer Science 14 9%
Chemistry 8 5%
Engineering 6 4%
Other 22 14%
Unknown 45 29%
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Attention Score in Context

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