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High-Throughput Screening Assays in Toxicology

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Cover of 'High-Throughput Screening Assays in Toxicology'

Table of Contents

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    Book Overview
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    Chapter 1 Monitoring Ligand-Activated Protein–Protein Interactions Using Bioluminescent Resonance Energy Transfer (BRET) Assay
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    Chapter 2 Mitochondrial Membrane Potential Assay
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    Chapter 3 High-Throughput Screening Assays in Toxicology
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    Chapter 4 Quantitative High-Throughput Luciferase Screening in Identifying CAR Modulators
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    Chapter 5 Transactivation and Coactivator Recruitment Assays for Measuring Farnesoid X Receptor Activity
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    Chapter 6 Cell-Based Assay for Identifying the Modulators of Antioxidant Response Element Signaling Pathway
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    Chapter 7 Study Liver Cytochrome P450 3A4 Inhibition and Hepatotoxicity Using DMSO-Differentiated HuH-7 Cells
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    Chapter 8 Determination of Histone H2AX Phosphorylation in DT40 Cells
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    Chapter 9 High-Throughput and High-Content Micronucleus Assay in CHO-K1 Cells
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    Chapter 10 High-Throughput Screening Assays in Toxicology
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    Chapter 11 High-Throughput Screening Assays in Toxicology
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    Chapter 12 A Quantitative High-Throughput Screening Data Analysis Pipeline for Activity Profiling
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    Chapter 13 Correction of Microplate Data from High-Throughput Screening
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    Chapter 14 CurveP Method for Rendering High-Throughput Screening Dose-Response Data into Digital Fingerprints
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    Chapter 15 Accounting Artifacts in High-Throughput Toxicity Assays
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    Chapter 16 Accessing the High-Throughput Screening Data Landscape
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    Chapter 17 Curating and Preparing High-Throughput Screening Data for Quantitative Structure-Activity Relationship Modeling
Attention for Chapter 13: Correction of Microplate Data from High-Throughput Screening
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Chapter title
Correction of Microplate Data from High-Throughput Screening
Chapter number 13
Book title
High-Throughput Screening Assays in Toxicology
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-6346-1_13
Pubmed ID
Book ISBNs
978-1-4939-6344-7, 978-1-4939-6346-1
Authors

Yuhong Wang, Ruili Huang, Wang, Yuhong, Huang, Ruili

Abstract

High-throughput screening (HTS) makes it possible to collect cellular response data from a large number of cell lines and small molecules in a timely and cost-effective manner. The errors and noises in the microplate-formatted data from HTS have unique characteristics, and they can be generally grouped into three categories: run-wise (temporal, multiple plates), plate-wise (background pattern, single plate), and well-wise (single well). In this chapter, we describe a systematic solution for identifying and correcting such errors and noises, mainly basing on pattern recognition and digital signal processing technologies.

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Mendeley readers

The data shown below were compiled from readership statistics for 10 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 10 100%

Demographic breakdown

Readers by professional status Count As %
Student > Bachelor 3 30%
Student > Ph. D. Student 2 20%
Student > Doctoral Student 2 20%
Unknown 3 30%
Readers by discipline Count As %
Medicine and Dentistry 2 20%
Environmental Science 1 10%
Nursing and Health Professions 1 10%
Biochemistry, Genetics and Molecular Biology 1 10%
Computer Science 1 10%
Other 1 10%
Unknown 3 30%