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Plant Synthetic Promoters

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Cover of 'Plant Synthetic Promoters'

Table of Contents

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    Book Overview
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    Chapter 1 Plant Synthetic Promoters
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    Chapter 2 Quantitative Analysis of Cis-Regulatory Element Activity Using Synthetic Promoters in Transgenic Plants
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    Chapter 3 The Identification of Cis-Regulatory Sequence Motifs in Gene Promoters Based on SNP Information
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    Chapter 4 Plant Synthetic Promoters
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    Chapter 5 Analyzing Synthetic Promoters Using Arabidopsis Protoplasts
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    Chapter 6 Selecting Hypomethylated Genomic Regions Using MRE-Seq
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    Chapter 7 Spatio-Temporal Imaging of Promoter Activity in Intact Plant Tissues
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    Chapter 8 Novel Synthetic Promoters from the Cestrum Yellow Leaf Curling Virus
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    Chapter 9 Fast and Efficient Cloning of Cis-Regulatory Sequences for High-Throughput Yeast One-Hybrid Analyses of Transcription Factors
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    Chapter 10 The Physcomitrella patens System for Transient Gene Expression Assays
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    Chapter 11 Analysis of Microbe-Associated Molecular Pattern-Responsive Synthetic Promoters with the Parsley Protoplast System
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    Chapter 12 A Framework for Discovering, Designing, and Testing MicroProteins to Regulate Synthetic Transcriptional Modules
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    Chapter 13 Simultaneous Analysis of Multiple Promoters: An Application of the PC-GW Binary Vector Series
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    Chapter 14 Plant Synthetic Promoters
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    Chapter 15 Bioinformatic Identification of Conserved Cis-Sequences in Coregulated Genes
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    Chapter 16 In Silico Expression Analysis
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    Chapter 17 FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces
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    Chapter 18 RSAT::Plants: Motif Discovery Within Clusters of Upstream Sequences in Plant Genomes
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    Chapter 19 Plant Synthetic Promoters
Attention for Chapter 11: Analysis of Microbe-Associated Molecular Pattern-Responsive Synthetic Promoters with the Parsley Protoplast System
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Chapter title
Analysis of Microbe-Associated Molecular Pattern-Responsive Synthetic Promoters with the Parsley Protoplast System
Chapter number 11
Book title
Plant Synthetic Promoters
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-6396-6_11
Pubmed ID
Book ISBNs
978-1-4939-6394-2, 978-1-4939-6396-6
Authors

Konstantin Kanofsky, Mona Lehmeyer, Jutta Schulze, Reinhard Hehl

Editors

Reinhard Hehl

Abstract

Plants recognize pathogens by microbe-associated molecular patterns (MAMPs) and subsequently induce an immune response. The regulation of gene expression during the immune response depends largely on cis-sequences conserved in promoters of MAMP-responsive genes. These cis-sequences can be analyzed by constructing synthetic promoters linked to a reporter gene and by testing these constructs in transient expression systems. Here, the use of the parsley (Petroselinum crispum) protoplast system for analyzing MAMP-responsive synthetic promoters is described. The synthetic promoter consists of four copies of a potential MAMP-responsive cis-sequence cloned upstream of a minimal promoter and the uidA reporter gene. The reporter plasmid contains a second reporter gene, which is constitutively expressed and hence eliminates the requirement of a second plasmid used as a transformation control. The reporter plasmid is transformed into parsley protoplasts that are elicited by the MAMP Pep25. The MAMP responsiveness is validated by comparing the reporter gene activity from MAMP-treated and untreated cells and by normalizing reporter gene activity using the constitutively expressed reporter gene.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 5 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 5 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 40%
Professor > Associate Professor 1 20%
Student > Doctoral Student 1 20%
Student > Master 1 20%
Readers by discipline Count As %
Pharmacology, Toxicology and Pharmaceutical Science 1 20%
Biochemistry, Genetics and Molecular Biology 1 20%
Agricultural and Biological Sciences 1 20%
Immunology and Microbiology 1 20%
Unknown 1 20%