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Zinc Finger Proteins

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Cover of 'Zinc Finger Proteins'

Table of Contents

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    Book Overview
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    Chapter 1 PRDM14, a Zinc Finger Protein, Regulates Cancer Stemness
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    Chapter 2 Computational Methods for Analysis of the DNA-Binding Preferences of Cys2His2 Zinc-Finger Proteins
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    Chapter 3 Design and Application of 6mA-Specific Zinc-Finger Proteins for the Readout of DNA Methylation
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    Chapter 4 Enhanced Manipulation of Human Mitochondrial DNA Heteroplasmy In Vitro Using Tunable mtZFN Technology
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    Chapter 5 Engineering RNA-Binding Proteins by Modular Assembly of RanBP2-Type Zinc Fingers
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    Chapter 6 Design of a System for Monitoring Ubiquitination Activities of E2 Enzymes Using Engineered RING Finger Proteins
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    Chapter 7 Directed Evolution of Targeted Recombinases for Genome Engineering
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    Chapter 8 Optical Recording of Cellular Zinc Dynamics with Zinc-Finger-Based Biosensors
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    Chapter 9 Delivery of Superoxide Dismutase Using Cys 2 -His 2 Zinc-Finger Proteins
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    Chapter 10 Genome Editing of MSCs as a Platform for Cell Therapy
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    Chapter 11 Integrated Multimodal Evaluation of Genotoxicity in ZFN-Modified Primary Human Cells
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    Chapter 12 Selection and Characterization of DNA Aptamers Against FokI Nuclease Domain
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    Chapter 13 An Improved Genome Engineering Method Using Surrogate Reporter-Coupled Suicidal ZFNs
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    Chapter 14 Non-transgenic Approach to Deliver ZFNs in Seeds for Targeted Genome Engineering
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    Chapter 15 Gene Editing in Channel Catfish via Double Electroporation of Zinc-Finger Nucleases
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    Chapter 16 Delivery of mtZFNs into Early Mouse Embryos
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    Chapter 17 Stereotaxic Surgery and Viral Delivery of Zinc-Finger Epigenetic Editing Tools in Rodent Brain
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    Chapter 18 In Vivo Applications of Cell-Penetrating Zinc-Finger Transcription Factors
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    Chapter 19 Manufacturing and Delivering Genome-Editing Proteins
Attention for Chapter 13: An Improved Genome Engineering Method Using Surrogate Reporter-Coupled Suicidal ZFNs
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Chapter title
An Improved Genome Engineering Method Using Surrogate Reporter-Coupled Suicidal ZFNs
Chapter number 13
Book title
Zinc Finger Proteins
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-8799-3_13
Pubmed ID
Book ISBNs
978-1-4939-8798-6, 978-1-4939-8799-3
Authors

Jiani Xing, Cunfang Zhang, Kun Xu, Linyong Hu, Ling Wang, Tingting Zhang, Chonghua Ren, Zhiying Zhang, Xing, Jiani, Zhang, Cunfang, Xu, Kun, Hu, Linyong, Wang, Ling, Zhang, Tingting, Ren, Chonghua, Zhang, Zhiying

Abstract

Using engineered nucleases such as zinc-finger nucleases (ZFNs) and TALE nuclease (TALEN) to accomplish genome editing often causes high cellular toxicity because of the consistent expression of artificial nucleases and off-targeting effect. And lacking selection marker in modified cells makes it hard to enrich these positive cells. Here we introduce a method by incorporating a surrogate reporter enrichment into a suicidal ZFN system, which is designed by a pair of ZFN expression cassettes flanked with its target sites. Our data demonstrated that this modified system achieved almost the same ZFN activity as the original method but reduced ~40% toxicity. This new suicidal ZFN expression system coupled with a surrogate reporter not only enables decreased cellular toxicity but also makes the genetic modified cells to be enriched by EGFP analysis.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 8 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 8 100%

Demographic breakdown

Readers by professional status Count As %
Student > Bachelor 2 25%
Unknown 6 75%
Readers by discipline Count As %
Agricultural and Biological Sciences 1 13%
Immunology and Microbiology 1 13%
Medicine and Dentistry 1 13%
Unknown 5 63%