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Plastids

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Cover of 'Plastids'

Table of Contents

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    Book Overview
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    Chapter 1 Primary Endosymbiosis: Emergence of the Primary Chloroplast and the Chromatophore, Two Independent Events
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    Chapter 2 Complex Endosymbioses I: From Primary to Complex Plastids, Multiple Independent Events
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    Chapter 3 Complex Endosymbioses II: The Nonphotosynthetic Plastid of Apicomplexa Parasites (The Apicoplast) and Its Integrated Metabolism
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    Chapter 4 Diversity and Plasticity of Plastids in Land Plants
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    Chapter 5 The Main Functions of Plastids
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    Chapter 6 Plastid Transient and Stable Interactions with Other Cell Compartments
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    Chapter 7 Imaging Plastids in 2D and 3D: Confocal and Electron Microscopy
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    Chapter 8 Purification of Chloroplasts and Chloroplast Subfractions: Envelope, Thylakoids, and Stroma—From Spinach, Pea, and Arabidopsis thaliana
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    Chapter 9 Isolation of Inner and Outer Membranes of the Chloroplast Envelope from Spinach and Pea
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    Chapter 10 Purification of Nongreen Plastids (Proplastids and Amyloplasts) from Angiosperms, and Isolation of Their Envelope Membranes
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    Chapter 11 In Vitro Protein Import into Isolated Chloroplasts
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    Chapter 12 Analysis of the MTL Supercomplex at Contact Sites Between Mitochondria and Plastids
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    Chapter 13 Isolation of Plastid Fractions from the Diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum
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    Chapter 14 Isolating the Plasmodium falciparum Apicoplast Using Magnetic Beads
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    Chapter 15 Extraction and Quantification of Lipids from Plant or Algae
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    Chapter 16 Quantitative Assessment of the Chloroplast Lipidome
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    Chapter 17 Determination of the DNA/RNA-Associated Subproteome from Chloroplasts and Other Plastid Types
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    Chapter 18 Mapping Plastid Transcript Population by Circular Reverse Transcription Polymerase Chain Reaction
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    Chapter 19 Bioinformatic Analysis of Chloroplast Gene Expression and RNA Posttranscriptional Maturations Using RNA Sequencing
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    Chapter 20 A Guide to the Chloroplast Transcriptome Analysis Using RNA-Seq
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    Chapter 21 A Toolkit for the Characterization of the Photoprotective Capacity of Green Algae
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    Chapter 22 Rescue of Deletion Mutants to Isolate Plastid Transformants in Higher Plants
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    Chapter 23 Genetic Analysis of Chloroplast Biogenesis, and Function and Mutant Collections
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    Chapter 24 Generation of Mutants of Nuclear-Encoded Plastid Proteins Using CRISPR/Cas9 in the Diatom Phaeodactylum tricornutum
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    Chapter 25 In Silico Tools for the Prediction of Protein Import into Secondary Plastids
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    Chapter 26 AT_CHLORO: The First Step When Looking for Information About Subplastidial Localization of Proteins
Attention for Chapter 13: Isolation of Plastid Fractions from the Diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum
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Chapter title
Isolation of Plastid Fractions from the Diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum
Chapter number 13
Book title
Plastids
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-8654-5_13
Pubmed ID
Book ISBNs
978-1-4939-8653-8, 978-1-4939-8654-5
Authors

Alexander F. Schober, Serena Flori, Giovanni Finazzi, Peter G. Kroth, Carolina Río Bártulos, Schober, Alexander F., Flori, Serena, Finazzi, Giovanni, Kroth, Peter G., Bártulos, Carolina Río

Abstract

The so-called "complex" plastids from diatoms possessing four envelope membranes are a typical feature of algae that arose from secondary endosymbiosis. Studying isolated plastids from these algae may allow answering a number of fundamental questions regarding diatom photosynthesis and plastid functionality. Due to their complex architecture and their integration into the cellular endoplasmic reticulum (ER) system, their isolation though is still challenging. In this work, we report a reliable isolation technique that is applicable for the two model diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum. The resulting plastid-enriched fractions are of homogenous quality, almost free from cellular contaminants, and feature structurally intact thylakoids that are capable to perform oxygenic photosynthesis, though in most cases they seem to lack most of the stromal components as well as plastid envelopes.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 17 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 17 100%

Demographic breakdown

Readers by professional status Count As %
Student > Master 3 18%
Researcher 3 18%
Student > Ph. D. Student 3 18%
Lecturer 2 12%
Student > Bachelor 1 6%
Other 1 6%
Unknown 4 24%
Readers by discipline Count As %
Agricultural and Biological Sciences 6 35%
Biochemistry, Genetics and Molecular Biology 4 24%
Physics and Astronomy 2 12%
Unknown 5 29%