Chapter title |
The Dynamic Process of Drug–GPCR Binding at Either Orthosteric or Allosteric Sites Evaluated by Metadynamics
|
---|---|
Chapter number | 18 |
Book title |
G Protein-Coupled Receptors in Drug Discovery
|
Published in |
Methods in molecular biology, January 2015
|
DOI | 10.1007/978-1-4939-2914-6_18 |
Pubmed ID | |
Book ISBNs |
978-1-4939-2913-9, 978-1-4939-2914-6
|
Authors |
Sebastian Schneider, Davide Provasi, Marta Filizola, Schneider, Sebastian, Provasi, Davide, Filizola, Marta |
Abstract |
Major advances in G Protein-Coupled Receptor (GPCR) structural biology over the past few years have yielded a significant number of high-resolution crystal structures for several different receptor subtypes. This dramatic increase in GPCR structural information has underscored the use of automated docking algorithms for the discovery of novel ligands that can eventually be developed into improved therapeutics. However, these algorithms are often unable to discriminate between different, yet energetically similar, poses because of their relatively simple scoring functions. Here, we describe a metadynamics-based approach to study the dynamic process of ligand binding to/unbinding from GPCRs with a higher level of accuracy and yet satisfying efficiency. |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
United States | 1 | 5% |
Unknown | 20 | 95% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Student > Master | 4 | 19% |
Student > Postgraduate | 4 | 19% |
Student > Ph. D. Student | 4 | 19% |
Researcher | 3 | 14% |
Student > Bachelor | 1 | 5% |
Other | 1 | 5% |
Unknown | 4 | 19% |
Readers by discipline | Count | As % |
---|---|---|
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Chemistry | 4 | 19% |
Agricultural and Biological Sciences | 3 | 14% |
Pharmacology, Toxicology and Pharmaceutical Science | 2 | 10% |
Immunology and Microbiology | 1 | 5% |
Other | 3 | 14% |
Unknown | 4 | 19% |