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RNA Nanotechnology and Therapeutics

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Cover of 'RNA Nanotechnology and Therapeutics'

Table of Contents

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    Book Overview
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    Chapter 1 Overview of methods in RNA nanotechnology: synthesis, purification, and characterization of RNA nanoparticles.
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    Chapter 2 Multiple Approaches for the Investigation of Bacterial Small Regulatory RNAs Self-assembly.
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    Chapter 3 Measuring the Elasticity of Ribonucleotide(s)-Containing DNA Molecules Using AFM.
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    Chapter 4 Silver nanoclusters for RNA nanotechnology: steps towards visualization and tracking of RNA nanoparticle assemblies.
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    Chapter 5 Large scale purification of RNA nanoparticles by preparative ultracentrifugation.
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    Chapter 6 HPLC Purification of RNA Aptamers up to 59 Nucleotides with Single-Nucleotide Resolution
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    Chapter 7 Using RNA nanoparticles with thermostable motifs and fluorogenic modules for real-time detection of RNA folding and turnover in prokaryotic and eukaryotic cells.
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    Chapter 8 Fluorescence Labeling of Short RNA by Oxidation at the 3′-End
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    Chapter 9 Methods and assays for specific targeting and delivery of RNA nanoparticles to cancer metastases.
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    Chapter 10 Functional assays for specific targeting and delivery of RNA nanoparticles to brain tumor.
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    Chapter 11 Aptamer-Mediated Nanoparticle Interactions: From Oligonucleotide–Protein Complexes to SELEX Screens
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    Chapter 12 Methods for Assembling B-Cell Lymphoma Specific and Internalizing Aptamer-siRNA Nanoparticles Via the Sticky Bridge.
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    Chapter 13 A high-throughput screening assay for the functional delivery of splice-switching oligonucleotides in human melanoma cells.
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    Chapter 14 Design, Assembly, and Evaluation of RNA-Protein Nanostructures.
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    Chapter 15 Mapping RNA Interactions to Proteins in Virions Using CLIP-Seq
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    Chapter 16 Mapping Protein–RNA Interactions by RCAP, RNA-Cross-Linking and Peptide Fingerprinting
Attention for Chapter 13: A high-throughput screening assay for the functional delivery of splice-switching oligonucleotides in human melanoma cells.
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Chapter title
A high-throughput screening assay for the functional delivery of splice-switching oligonucleotides in human melanoma cells.
Chapter number 13
Book title
RNA Nanotechnology and Therapeutics
Published in
Methods in molecular biology, January 2015
DOI 10.1007/978-1-4939-2562-9_13
Pubmed ID
Book ISBNs
978-1-4939-2561-2, 978-1-4939-2562-9
Authors

Dean, John M, DeLong, Robert K, John M. Dean, Robert K. DeLong, Dean, John M., DeLong, Robert K.

Abstract

Since the conception of RNA nanotechnology (Cell, 94:147, 1998), there has been tremendous interest in its application for the functional delivery of RNA into cells. Splice-switching oligonucleotides (SSOs) are an emerging antisense drug class with the ability to therapeutically modify gene expression. A wide variety of chemical modifications have been devised to try to increase the activity and stability of SSOs. Also, as with most nucleic acid therapeutics, delivery into the cell is the major hurdle for in vivo and clinical applications. As a result, various RNA nanoparticles are being constructed for targeted delivery of therapeutics. However, it is difficult to find a practical assay to measure splice-switching activity. Here, we describe a model delivery system that can be used as a convenient, high-throughput assay to quantitatively measure the functional delivery and splicing redirection in a live human melanoma cell line.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 12 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 12 100%

Demographic breakdown

Readers by professional status Count As %
Student > Master 4 33%
Student > Ph. D. Student 3 25%
Other 2 17%
Student > Doctoral Student 1 8%
Professor > Associate Professor 1 8%
Other 0 0%
Unknown 1 8%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 3 25%
Pharmacology, Toxicology and Pharmaceutical Science 2 17%
Agricultural and Biological Sciences 2 17%
Chemistry 2 17%
Business, Management and Accounting 1 8%
Other 1 8%
Unknown 1 8%