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RNA Nanotechnology and Therapeutics

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Cover of 'RNA Nanotechnology and Therapeutics'

Table of Contents

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    Book Overview
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    Chapter 1 Overview of methods in RNA nanotechnology: synthesis, purification, and characterization of RNA nanoparticles.
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    Chapter 2 Multiple Approaches for the Investigation of Bacterial Small Regulatory RNAs Self-assembly.
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    Chapter 3 Measuring the Elasticity of Ribonucleotide(s)-Containing DNA Molecules Using AFM.
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    Chapter 4 Silver nanoclusters for RNA nanotechnology: steps towards visualization and tracking of RNA nanoparticle assemblies.
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    Chapter 5 Large scale purification of RNA nanoparticles by preparative ultracentrifugation.
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    Chapter 6 HPLC Purification of RNA Aptamers up to 59 Nucleotides with Single-Nucleotide Resolution
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    Chapter 7 Using RNA nanoparticles with thermostable motifs and fluorogenic modules for real-time detection of RNA folding and turnover in prokaryotic and eukaryotic cells.
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    Chapter 8 Fluorescence Labeling of Short RNA by Oxidation at the 3′-End
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    Chapter 9 Methods and assays for specific targeting and delivery of RNA nanoparticles to cancer metastases.
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    Chapter 10 Functional assays for specific targeting and delivery of RNA nanoparticles to brain tumor.
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    Chapter 11 Aptamer-Mediated Nanoparticle Interactions: From Oligonucleotide–Protein Complexes to SELEX Screens
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    Chapter 12 Methods for Assembling B-Cell Lymphoma Specific and Internalizing Aptamer-siRNA Nanoparticles Via the Sticky Bridge.
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    Chapter 13 A high-throughput screening assay for the functional delivery of splice-switching oligonucleotides in human melanoma cells.
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    Chapter 14 Design, Assembly, and Evaluation of RNA-Protein Nanostructures.
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    Chapter 15 Mapping RNA Interactions to Proteins in Virions Using CLIP-Seq
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    Chapter 16 Mapping Protein–RNA Interactions by RCAP, RNA-Cross-Linking and Peptide Fingerprinting
Attention for Chapter 11: Aptamer-Mediated Nanoparticle Interactions: From Oligonucleotide–Protein Complexes to SELEX Screens
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Chapter title
Aptamer-Mediated Nanoparticle Interactions: From Oligonucleotide–Protein Complexes to SELEX Screens
Chapter number 11
Book title
RNA Nanotechnology and Therapeutics
Published in
Methods in molecular biology, January 2015
DOI 10.1007/978-1-4939-2562-9_11
Pubmed ID
Book ISBNs
978-1-4939-2561-2, 978-1-4939-2562-9
Authors

Laetitia Evadé, Eric Dausse, Said Taouji, Emilie Daguerre, Eric Chevet, Jean-Jacques Toulmé, Evadé, Laetitia, Dausse, Eric, Taouji, Said, Daguerre, Emilie, Chevet, Eric, Toulmé, Jean-Jacques

Abstract

Aptamers are oligonucleotides displaying specific binding properties for a predetermined target. They can be easily immobilized on various surfaces such as nanoparticles. Functionalized particles can then be used to various aims. We took advantage of the AlphaScreen(®) technology for monitoring aptamer-mediated interactions. A particle bearing an aptamer contains a photosensitizer whereas another type of particle contains a chemiluminescer. Irradiation causes the formation of singlet oxygen species in the photosensitizer-containing bead that in turn activates the chemiluminescer. Luminescence emission can be observed if the two types of beads are in close proximity (<200 nm). This is achieved when the cognate ligand of the aptamer is grafted onto the chemiluminescer-containing bead. Using this technology we have screened oligonucleotide libraries and monitored aptamer-protein interactions. This constitutes the basis for aptamer-based analytical assays.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 7 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
China 1 14%
Unknown 6 86%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 29%
Other 1 14%
Student > Master 1 14%
Student > Ph. D. Student 1 14%
Professor > Associate Professor 1 14%
Other 1 14%
Readers by discipline Count As %
Agricultural and Biological Sciences 2 29%
Biochemistry, Genetics and Molecular Biology 1 14%
Pharmacology, Toxicology and Pharmaceutical Science 1 14%
Chemistry 1 14%
Engineering 1 14%
Other 0 0%
Unknown 1 14%