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Epigenome Editing

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Cover of 'Epigenome Editing'

Table of Contents

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    Book Overview
  2. Altmetric Badge
    Chapter 1 Editing the Epigenome: Overview, Open Questions, and Directions of Future Development
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    Chapter 2 Zinc Fingers, TALEs, and CRISPR Systems: A Comparison of Tools for Epigenome Editing
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    Chapter 3 Designing Epigenome Editors: Considerations of Biochemical and Locus Specificities
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    Chapter 4 Generation of TALE-Based Designer Epigenome Modifiers
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    Chapter 5 Neuroepigenetic Editing
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    Chapter 6 Allele-Specific Epigenome Editing
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    Chapter 7 Key to Delivery: The (Epi-)genome Editing Vector Toolbox
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    Chapter 8 CRISPR/dCas9 Switch Systems for Temporal Transcriptional Control
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    Chapter 9 Delivery of Designer Epigenome Modifiers into Primary Human T Cells
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    Chapter 10 Viral Expression of Epigenome Editing Tools in Rodent Brain Using Stereotaxic Surgery Techniques
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    Chapter 11 Stable Expression of Epigenome Editors via Viral Delivery and Genomic Integration
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    Chapter 12 Purified Protein Delivery to Activate an Epigenetically Silenced Allele in Mouse Brain
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    Chapter 13 Non-viral Methodology for Efficient Co-transfection
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    Chapter 14 Chromatin Immunoprecipitation in Human and Yeast Cells
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    Chapter 15 Chromatin Immunoprecipitation and High-Throughput Sequencing (ChIP-Seq): Tips and Tricks Regarding the Laboratory Protocol and Initial Downstream Data Analysis
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    Chapter 16 Generation of Whole Genome Bisulfite Sequencing Libraries for Comprehensive DNA Methylome Analysis
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    Chapter 17 Approaches for the Analysis and Interpretation of Whole Genome Bisulfite Sequencing Data
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    Chapter 18 Whole-Genome Bisulfite Sequencing for the Analysis of Genome-Wide DNA Methylation and Hydroxymethylation Patterns at Single-Nucleotide Resolution
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    Chapter 19 Locus-Specific DNA Methylation Analysis by Targeted Deep Bisulfite Sequencing
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    Chapter 20 DNA Methylation Analysis by Bisulfite Conversion Coupled to Double Multiplexed Amplicon-Based Next-Generation Sequencing (NGS)
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    Chapter 21 Cell-to-Cell Transcription Variability as Measured by Single-Molecule RNA FISH to Detect Epigenetic State Switching
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    Chapter 22 Establishment of Cell Lines Stably Expressing dCas9-Fusions to Address Kinetics of Epigenetic Editing
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    Chapter 23 Editing of DNA Methylation Using dCas9-Peptide Repeat and scFv-TET1 Catalytic Domain Fusions
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    Chapter 24 Chemical Inducible dCas9-Guided Editing of H3K27 Acetylation in Mammalian Cells
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    Chapter 25 Screening Regulatory Element Function with CRISPR/Cas9-based Epigenome Editing
Attention for Chapter 6: Allele-Specific Epigenome Editing
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Chapter title
Allele-Specific Epigenome Editing
Chapter number 6
Book title
Epigenome Editing
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7774-1_6
Pubmed ID
Book ISBNs
978-1-4939-7773-4, 978-1-4939-7774-1
Authors

Pavel Bashtrykov, Albert Jeltsch

Abstract

The discovery and adaptation of the CRISPR/Cas system for epigenome editing has allowed for a straightforward design of targeting modules which can direct epigenetic editors to virtually any genomic site. This advancement in DNA-targeting technology brings allele-specific epigenome editing into reach, a "super-specific" variation of epigenome editing whose goal is an alteration of chromatin marks at only one selected allele of the target genomic locus. This technology would be useful for the treatment of diseases caused by a mutant allele with a dominant effect, because allele-specific epigenome editing allows the specific silencing of the mutated allele leaving the healthy counterpart expressed. Moreover, it may allow the direct correction of aberrant imprints in imprinting disorders where editing of DNA methylation is needed in one allele only. Here, we describe some principal setups of allele-specific epigenome editing systems and present exemplary data illustrating the feasibility of the concept.

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X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 13 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 13 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 3 23%
Lecturer > Senior Lecturer 2 15%
Student > Bachelor 2 15%
Student > Ph. D. Student 2 15%
Student > Master 2 15%
Other 1 8%
Unknown 1 8%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 6 46%
Agricultural and Biological Sciences 2 15%
Linguistics 1 8%
Chemical Engineering 1 8%
Nursing and Health Professions 1 8%
Other 1 8%
Unknown 1 8%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 11 March 2018.
All research outputs
#18,590,133
of 23,026,672 outputs
Outputs from Methods in molecular biology
#7,971
of 13,170 outputs
Outputs of similar age
#330,575
of 442,370 outputs
Outputs of similar age from Methods in molecular biology
#950
of 1,499 outputs
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