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Epigenome Editing

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Cover of 'Epigenome Editing'

Table of Contents

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    Book Overview
  2. Altmetric Badge
    Chapter 1 Editing the Epigenome: Overview, Open Questions, and Directions of Future Development
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    Chapter 2 Zinc Fingers, TALEs, and CRISPR Systems: A Comparison of Tools for Epigenome Editing
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    Chapter 3 Designing Epigenome Editors: Considerations of Biochemical and Locus Specificities
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    Chapter 4 Generation of TALE-Based Designer Epigenome Modifiers
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    Chapter 5 Neuroepigenetic Editing
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    Chapter 6 Allele-Specific Epigenome Editing
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    Chapter 7 Key to Delivery: The (Epi-)genome Editing Vector Toolbox
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    Chapter 8 CRISPR/dCas9 Switch Systems for Temporal Transcriptional Control
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    Chapter 9 Delivery of Designer Epigenome Modifiers into Primary Human T Cells
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    Chapter 10 Viral Expression of Epigenome Editing Tools in Rodent Brain Using Stereotaxic Surgery Techniques
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    Chapter 11 Stable Expression of Epigenome Editors via Viral Delivery and Genomic Integration
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    Chapter 12 Purified Protein Delivery to Activate an Epigenetically Silenced Allele in Mouse Brain
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    Chapter 13 Non-viral Methodology for Efficient Co-transfection
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    Chapter 14 Chromatin Immunoprecipitation in Human and Yeast Cells
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    Chapter 15 Chromatin Immunoprecipitation and High-Throughput Sequencing (ChIP-Seq): Tips and Tricks Regarding the Laboratory Protocol and Initial Downstream Data Analysis
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    Chapter 16 Generation of Whole Genome Bisulfite Sequencing Libraries for Comprehensive DNA Methylome Analysis
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    Chapter 17 Approaches for the Analysis and Interpretation of Whole Genome Bisulfite Sequencing Data
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    Chapter 18 Whole-Genome Bisulfite Sequencing for the Analysis of Genome-Wide DNA Methylation and Hydroxymethylation Patterns at Single-Nucleotide Resolution
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    Chapter 19 Locus-Specific DNA Methylation Analysis by Targeted Deep Bisulfite Sequencing
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    Chapter 20 DNA Methylation Analysis by Bisulfite Conversion Coupled to Double Multiplexed Amplicon-Based Next-Generation Sequencing (NGS)
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    Chapter 21 Cell-to-Cell Transcription Variability as Measured by Single-Molecule RNA FISH to Detect Epigenetic State Switching
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    Chapter 22 Establishment of Cell Lines Stably Expressing dCas9-Fusions to Address Kinetics of Epigenetic Editing
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    Chapter 23 Editing of DNA Methylation Using dCas9-Peptide Repeat and scFv-TET1 Catalytic Domain Fusions
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    Chapter 24 Chemical Inducible dCas9-Guided Editing of H3K27 Acetylation in Mammalian Cells
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    Chapter 25 Screening Regulatory Element Function with CRISPR/Cas9-based Epigenome Editing
Attention for Chapter 5: Neuroepigenetic Editing
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Chapter title
Neuroepigenetic Editing
Chapter number 5
Book title
Epigenome Editing
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7774-1_5
Pubmed ID
Book ISBNs
978-1-4939-7773-4, 978-1-4939-7774-1
Authors

Peter J. Hamilton, Carissa J. Lim, Eric J. Nestler, Elizabeth A. Heller

Abstract

Studies of the mammalian nervous system have revealed widespread epigenetic regulation underlying gene expression intrinsic to basic neurobiological function as well as neurological disease. Over the past decade, a critical role has emerged for the neural regulation of chromatin-modifying enzymes during both development and adulthood, and in response to external stimuli. These biochemical data are complemented by numerous next generation sequencing (NGS) studies that quantify the extent of chromatin and DNA modifications in neurons. Neuroepigenetic editing tools can be applied to distinguish between the mere presence and functional relevance of such modifications to neural transcription and animal behavior. This review discusses current advances in neuroepigenetic editing, highlighting methodological considerations pertinent to neuroscience, such as delivery methods and the spatiotemporal specificity of editing. Although neuroepigenetic editing is a nascent field, the studies presented in this review demonstrate the enormous potential of this approach for basic neurobiological research and therapeutic application.

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X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 49 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 49 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 9 18%
Student > Bachelor 7 14%
Student > Master 7 14%
Researcher 3 6%
Professor 3 6%
Other 5 10%
Unknown 15 31%
Readers by discipline Count As %
Neuroscience 11 22%
Biochemistry, Genetics and Molecular Biology 9 18%
Medicine and Dentistry 4 8%
Agricultural and Biological Sciences 4 8%
Pharmacology, Toxicology and Pharmaceutical Science 2 4%
Other 4 8%
Unknown 15 31%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 05 February 2019.
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#20,468,008
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Outputs from Methods in molecular biology
#9,951
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#378,209
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Outputs of similar age from Methods in molecular biology
#1,194
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