| Chapter title |
Plant Genome Duplication Database.
|
|---|---|
| Chapter number | 16 |
| Book title |
Plant Genomics Databases
|
| Published in |
Methods in molecular biology, January 2017
|
| DOI | 10.1007/978-1-4939-6658-5_16 |
| Pubmed ID | |
| Book ISBNs |
978-1-4939-6656-1, 978-1-4939-6658-5
|
| Authors |
Tae-Ho Lee, Junah Kim, Jon S. Robertson, Andrew H. Paterson |
| Editors |
Aalt D.J van Dijk |
| Abstract |
Genome duplication, widespread in flowering plants, is a driving force in evolution. Genome alignments between/within genomes facilitate identification of homologous regions and individual genes to investigate evolutionary consequences of genome duplication. PGDD (the Plant Genome Duplication Database), a public web service database, provides intra- or interplant genome alignment information. At present, PGDD contains information for 47 plants whose genome sequences have been released. Here, we describe methods for identification and estimation of dates of genome duplication and speciation by functions of PGDD.The database is freely available at http://chibba.agtec.uga.edu/duplication/. |
Mendeley readers
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| Unknown | 12 | 100% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Student > Ph. D. Student | 2 | 17% |
| Professor > Associate Professor | 2 | 17% |
| Student > Doctoral Student | 2 | 17% |
| Student > Bachelor | 1 | 8% |
| Other | 1 | 8% |
| Other | 1 | 8% |
| Unknown | 3 | 25% |
| Readers by discipline | Count | As % |
|---|---|---|
| Agricultural and Biological Sciences | 6 | 50% |
| Biochemistry, Genetics and Molecular Biology | 2 | 17% |
| Unknown | 4 | 33% |