| Chapter title |
Selected Reaction Monitoring to Measure Proteins of Interest in Complex Samples: A Practical Guide.
|
|---|---|
| Chapter number | 4 |
| Book title |
Proteomics in Systems Biology
|
| Published in |
Methods in molecular biology, January 2016
|
| DOI | 10.1007/978-1-4939-3341-9_4 |
| Pubmed ID | |
| Book ISBNs |
978-1-4939-3339-6, 978-1-4939-3341-9
|
| Authors |
Yuehan Feng, Paola Picotti |
| Editors |
Jörg Reinders |
| Abstract |
Biology and especially systems biology projects increasingly require the capability to detect and quantify specific sets of proteins across multiple samples, for example the components of a biological pathway through a set of perturbation-response experiments. Targeted proteomics based on selected reaction monitoring (SRM) has emerged as an ideal tool to this purpose, and complements the discovery capabilities of shotgun proteomics methods. SRM experiments rely on the development of specific, quantitative mass spectrometric assays for each protein of interest and their application to the quantification of the protein set in various biological samples. SRM measurements are multiplexed, namely, multiple proteins can be quantified simultaneously, and are characterized by a high reproducibility and a broad dynamic range. We provide here a practical guide to the development of SRM assays targeting a set of proteins of interest and to their application to complex biological samples. |
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| Unknown | 1 | 100% |
Demographic breakdown
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Mendeley readers
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|---|---|---|
| Unknown | 17 | 100% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Student > Ph. D. Student | 3 | 18% |
| Researcher | 3 | 18% |
| Student > Postgraduate | 3 | 18% |
| Professor > Associate Professor | 2 | 12% |
| Student > Master | 1 | 6% |
| Other | 1 | 6% |
| Unknown | 4 | 24% |
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|---|---|---|
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| Agricultural and Biological Sciences | 2 | 12% |
| Unspecified | 1 | 6% |
| Social Sciences | 1 | 6% |
| Medicine and Dentistry | 1 | 6% |
| Other | 3 | 18% |
| Unknown | 3 | 18% |