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Proteomis in Systems Biology

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Cover of 'Proteomis in Systems Biology'

Table of Contents

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    Book Overview
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    Chapter 1 Multiplexed Quantitative Proteomics for High-Throughput Comprehensive Proteome Comparisons of Human Cell Lines.
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    Chapter 2 Sample Preparation Approaches for iTRAQ Labeling and Quantitative Proteomic Analyses in Systems Biology.
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    Chapter 3 Two Birds with One Stone: Parallel Quantification of Proteome and Phosphoproteome Using iTRAQ.
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    Chapter 4 Selected Reaction Monitoring to Measure Proteins of Interest in Complex Samples: A Practical Guide.
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    Chapter 5 Monitoring PPARG-Induced Changes in Glycolysis by Selected Reaction Monitoring Mass Spectrometry.
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    Chapter 6 A Targeted MRM Approach for Tempo-Spatial Proteomics Analyses.
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    Chapter 7 Targeted Phosphoproteome Analysis Using Selected/Multiple Reaction Monitoring (SRM/MRM).
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    Chapter 8 Testing Suitability of Cell Cultures for SILAC-Experiments Using SWATH-Mass Spectrometry.
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    Chapter 9 Combining Amine-Reactive Cross-Linkers and Photo-Reactive Amino Acids for 3D-Structure Analysis of Proteins and Protein Complexes.
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    Chapter 10 Tissue MALDI Mass Spectrometry Imaging (MALDI MSI) of Peptides.
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    Chapter 11 Ethyl Esterification for MALDI-MS Analysis of Protein Glycosylation.
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    Chapter 12 Characterization of Protein N-Glycosylation by Analysis of ZIC-HILIC-Enriched Intact Proteolytic Glycopeptides.
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    Chapter 13 Simple and Effective Affinity Purification Procedures for Mass Spectrometry-Based Identification of Protein-Protein Interactions in Cell Signaling Pathways.
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    Chapter 14 A Systems Approach to Understand Antigen Presentation and the Immune Response.
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    Chapter 15 Profiling of Small Molecules by Chemical Proteomics.
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    Chapter 16 Generating Sample-Specific Databases for Mass Spectrometry-Based Proteomic Analysis by Using RNA Sequencing.
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    Chapter 17 A Proteomic Workflow Using High-Throughput De Novo Sequencing Towards Complementation of Genome Information for Improved Comparative Crop Science.
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    Chapter 18 From Phosphoproteome to Modeling of Plant Signaling Pathways.
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    Chapter 19 Interpretation of Quantitative Shotgun Proteomic Data.
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    Chapter 20 A Simple Workflow for Large Scale Shotgun Glycoproteomics.
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    Chapter 21 Systemic Analysis of Regulated Functional Networks.
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