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Plant Gene Silencing

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Cover of 'Plant Gene Silencing'

Table of Contents

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    Book Overview
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    Chapter 1 Advances in Plant Gene Silencing Methods.
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    Chapter 2 Strategies for altering plant traits using virus-induced gene silencing technologies.
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    Chapter 3 Bioinformatics Tools for Achieving Better Gene Silencing in Plants.
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    Chapter 4 Profiling of Small RNAs Involved in Plant-Pathogen Interactions.
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    Chapter 5 RNAi-Mediated Resistance to Viruses in Genetically Engineered Plants.
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    Chapter 6 Simplifying Transgene Locus Structure Through Cre-lox Recombination.
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    Chapter 7 Transgene-Induced Gene Silencing in Plants.
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    Chapter 8 Gene silencing by DNA interference in fern gametophytes.
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    Chapter 9 Induction of Stable Epigenetic Gene Silencing in Plants Using a Virus Vector.
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    Chapter 10 A Method for Validating MicroRNAs in Plants by miR-RACE.
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    Chapter 11 MR VIGS: MicroRNA-Based Virus-Induced Gene Silencing in Plants.
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    Chapter 12 A High-Throughput RNA Interference (RNAi)-Based Approach Using Hairy Roots for the Study of Plant-Rhizobia Interactions.
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    Chapter 13 A Functional Genomics Method for Assaying Gene Function in Phytopathogenic Fungi Through Host-Induced Gene Silencing Mediated by Agroinfiltration.
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    Chapter 14 An Effective and Convenient Method for the Delivery of Apple Latent Spherical Virus (ALSV)-Based Vectors into Plant Cells by Agroinoculation.
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    Chapter 15 Virus-Induced Gene Silencing (VIGS) for Functional Genomics in Rice Using Rice tungro bacilliform virus (RTBV) as a Vector.
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    Chapter 16 Virus-induced gene silencing of fiber-related genes in cotton.
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    Chapter 17 Establishment of an Efficient Virus-Induced Gene Silencing (VIGS) Assay in Arabidopsis by Agrobacterium-Mediated Rubbing Infection.
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    Chapter 18 Virus-induced gene silencing as a scalable tool to study drought tolerance in plants.
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    Chapter 19 VIGS for Dissecting Mechanisms Involved in the Symbiotic Interaction of Microbes with Plants.
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    Chapter 20 Construction of a Cotton VIGS Library for Functional Genomics Study.
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    Chapter 21 Synthetic gene complementation to determine off-target silencing.
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    Chapter 22 Construction of Mismatched Inverted Repeat (IR) Silencing Vectors for Maximizing IR Stability and Effective Gene Silencing in Plants.
Attention for Chapter 1: Advances in Plant Gene Silencing Methods.
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Chapter title
Advances in Plant Gene Silencing Methods.
Chapter number 1
Book title
Plant Gene Silencing
Published in
Methods in molecular biology, February 2015
DOI 10.1007/978-1-4939-2453-0_1
Pubmed ID
Book ISBNs
978-1-4939-2452-3, 978-1-4939-2453-0
Authors

Prachi Pandey, Muthappa Senthil-Kumar, Kirankumar S Mysore, Kirankumar S. Mysore, Pandey, Prachi, Senthil-Kumar, Muthappa, Mysore, Kirankumar S.

Editors

Kirankumar S. Mysore, Muthappa Senthil-Kumar

Abstract

Understanding molecular mechanisms of transcriptional and posttranscriptional gene silencing pathways in plants over the past decades has led to development of tools and methods for silencing a target gene in various plant species. In this review chapter, both the recent understanding of molecular basis of gene silencing pathways and advances in various widely used gene silencing methods are compiled. We also discuss the salient features of the different methods like RNA interference (RNAi) and virus-induced gene silencing (VIGS) and highlight their advantages and disadvantages. Gene silencing technology is constantly progressing as reflected by rapidly emerging new methods. A succinct discussion on the recently developed methods like microRNA-mediated virus-induced gene silencing (MIR-VIGS) and microRNA-induced gene silencing (MIGS) is also provided. One major bottleneck in gene silencing approaches has been the associated off-target silencing. The other hurdle has been the lack of a universal approach that can be applied to all plants. For example, we face hurdles like incompatibility of VIGS vectors with the host and inability to use MIGS for plant species which are not easily transformable. However, the overwhelming research in this direction reflects the scope for overcoming the short comings of gene silencing technology.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 27 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 27 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 8 30%
Student > Master 4 15%
Student > Bachelor 4 15%
Other 2 7%
Researcher 2 7%
Other 2 7%
Unknown 5 19%
Readers by discipline Count As %
Agricultural and Biological Sciences 13 48%
Biochemistry, Genetics and Molecular Biology 6 22%
Environmental Science 1 4%
Medicine and Dentistry 1 4%
Unknown 6 22%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 06 March 2015.
All research outputs
#20,264,045
of 22,794,367 outputs
Outputs from Methods in molecular biology
#9,900
of 13,110 outputs
Outputs of similar age
#217,284
of 257,458 outputs
Outputs of similar age from Methods in molecular biology
#62
of 87 outputs
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So far Altmetric has tracked 13,110 research outputs from this source. They receive a mean Attention Score of 3.3. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 87 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.