Computational Science – ICCS 2009

Table of Contents

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   Book Overview
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   Chapter 1 Electronic Structure Calculations and Adaptation Scheme in Multi-core Computing Environments
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   Chapter 2 A Fuzzy Logic Fish School Model
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   Chapter 3 An Open Domain-Extensible Environment for Simulation-Based Scientific Investigation (ODESSI)
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   Chapter 4 Pattern-Based Genetic Algorithm Approach to Coverage Path Planning for Mobile Robots
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   Chapter 5 Economic Models with Chaotic Money Exchange
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   Chapter 6 Knowledge Aware Bisimulation and Anonymity
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   Chapter 7 A Parallel High-Order Discontinuous Galerkin Shallow Water Model
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   Chapter 8 CelOWS: A Service Oriented Architecture to Define, Query and Reuse Biological Models
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    Chapter 9 Computational Science – ICCS 2009
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    Chapter 10 A Population-Based Approach for Diversified Protein Loop Structure Sampling
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    Chapter 11 Parameter Space Exploration Using Scientific Workflows
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    Chapter 12 Interactive Parallel Analysis on the ALICE Grid with the PROOF Framework
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    Chapter 13 A Comparison of Performance of Sequential Learning Algorithms on the Task of Named Entity Recognition for Indian Languages
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    Chapter 14 Managing Multi-concern Application Complexity in AspectSBASCO
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    Chapter 15 Balancing Scientist Needs and Volunteer Preferences in Volunteer Computing Using Constraint Optimization
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    Chapter 16 Hiding Communication Latency with Non-SPMD, Graph-Based Execution
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    Chapter 17 New Optimal Load Allocation for Scheduling Divisible Data Grid Applications
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    Chapter 18 Dynamic Resizing of Parallel Scientific Simulations: A Case Study Using LAMMPS
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    Chapter 19 Performance Evaluation of Collective Write Algorithms in MPI I/O
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    Chapter 20 Computational Science – ICCS 2009
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    Chapter 21 On the Origin of Grid Species: The Living Application
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    Chapter 22 Applying Processes Rescheduling over Irregular BSP Application
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    Chapter 23 Support for Urgent Computing Based on Resource Virtualization
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    Chapter 24 Dynamic Software Updates for Accelerating Scientific Discovery
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    Chapter 25 Generating Empirically Optimized Composed Matrix Kernels from MATLAB Prototypes
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    Chapter 26 Automated Provenance Collection for CCA Component Assemblies
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    Chapter 27 Modular, Fine-Grained Adaptation of Parallel Programs
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    Chapter 28 Evaluating Algorithms for Shared File Pointer Operations in MPI I/O
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    Chapter 29 Load Balancing Scheme Based on Real Time Traffic in Wibro
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    Chapter 30 Hybrid Retrieval Mechanisms in Vehicle-Based P2P Networks
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    Chapter 31 An Algorithm for Unrestored Flow Optimization in Survivable Networks Based on p-Cycles
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    Chapter 32 Unrestored Flow Optimization in Survivable Networks Based on p-Cycles
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    Chapter 33 Hierarchical Modelling and Model Adaptivity for Gas Flow on Networks
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    Chapter 34 A Hierarchical Methodology to Specify and Simulate Complex Computational Systems
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    Chapter 35 GRID Resource Searching on the GridSim Simulator
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    Chapter 36 Evaluation of Different BDD Libraries to Extract Concepts in FCA – Perspectives and Limitations
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    Chapter 37 Comparing Genetic Algorithms and Newton-Like Methods for the Solution of the History Matching Problem
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    Chapter 38 Complex System Simulations with QosCosGrid
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    Chapter 39 Geostatistical Computing in PSInSAR Data Analysis
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    Chapter 40 Improving the Scalability of SimGrid Using Dynamic Routing
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    Chapter 41 Semantic Visual Abstraction for Face Recognition
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    Chapter 42 High Frequency Assessment from Multiresolution Analysis
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    Chapter 43 Virtual Human Imaging
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    Chapter 44 Interactive Visualization of Network Anomalous Events
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    Chapter 45 Towards Low-Cost, High-Accuracy Classifiers for Linear Solver Selection
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    Chapter 46 Testing Line Search Techniques for Finite Element Discretizations for Unsaturated Flow
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    Chapter 47 Computational Science – ICCS 2009
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    Chapter 48 Parallel MLEM on Multicore Architectures
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    Chapter 49 Experience with Approximations in the Trust-Region Parallel Direct Search Algorithm
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    Chapter 50 A 3D Vector-Additive Iterative Solver for the Anisotropic Inhomogeneous Poisson Equation in the Forward EEG problem
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    Chapter 51 Hash Functions Based on Large Quasigroups
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    Chapter 52 Second Derivative Approximation for Origin-Based Algorithm
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    Chapter 53 Evaluation of Hierarchical Mesh Reorderings
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    Chapter 54 Minkowski Functionals Study of Random Number Sequences
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    Chapter 55 Autonomous Leaves Graph Applied to the Boundary Layer Problem
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    Chapter 56 Finite-Element Non-conforming h-Adaptive Strategy Based on Autonomous Leaves Graph
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    Chapter 57 Integers Powers of Certain Asymmetric Matrices
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    Chapter 58 Numerical Simulation of the Dynamics of a Periodically Forced Spherical Particle in a Quiescent Newtonian Fluid at Low Reynolds Numbers
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    Chapter 59 Bending Virtual Spring-Damper: A Solution to Improve Local Platoon Control
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    Chapter 60 Parallel Algorithms for Dandelion-Like Codes
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    Chapter 61 Deterministic Computation of Pseudorandomness in Sequences of Cryptographic Application
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    Chapter 62 Parallel Simulated Annealing for the Job Shop Scheduling Problem
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    Chapter 63 Developing Scientific Applications with Loosely-Coupled Sub-tasks
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    Chapter 64 Simulation of Multiphysics Multiscale Systems, 6th International Workshop
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    Chapter 65 Two-Dimensional Micro-Hartmann Gas Flows
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    Chapter 66 Computational Science – ICCS 2009
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    Chapter 67 Evaluation of Micronozzle Performance through DSMC, Navier-Stokes and Coupled DSMC/Navier-Stokes Approaches
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    Chapter 68 A Multilevel Multiscale Mimetic (M3) Method for an Anisotropic Infiltration Problem
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    Chapter 69 Computational Upscaling of Inertia Effects from Porescale to Mesoscale
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    Chapter 70 Towards a Complex Automata Multiscale Model of In-Stent Restenosis
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    Chapter 71 A Mechano-Chemical Model of a Solid Tumor for Therapy Outcome Predictions
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    Chapter 72 Simulating Individual-Based Models of Epidemics in Hierarchical Networks
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    Chapter 73 A Nonlinear Master Equation for a Degenerate Diffusion Model of Biofilm Growth
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    Chapter 74 Graphical Notation for Diagramming Coupled Systems
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    Chapter 75 Photoabsorption and Carrier Transport Modeling in Thin Multilayer Photovoltaic Cell
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    Chapter 76 Towards Multiscale Simulations of Carbon Nanotube Growth Process: A Density Functional Theory Study of Transition Metal Hydrides
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    Chapter 77 Darwin Approximation to Maxwell’s Equations
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    Chapter 78 Study of Parallel Linear Solvers for Three-Dimensional Subsurface Flow Problems
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    Chapter 79 A Domain Decomposition Based Parallel Inexact Newton’s Method with Subspace Correction for Incompressible Navier-Stokes Equations
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    Chapter 80 Bioinformatics’ Challenges to Computer Science: Bioinformatics Tools and Biomedical Modeling
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    Chapter 81 Cartesio: A Software Tool for Pre-implant Stent Analyses
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    Chapter 82 Determination of Cardiac Ejection Fraction by Electrical Impedance Tomography - Numerical Experiments and Viability Analysis
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    Chapter 83 Analysis of Muscle and Metabolic Activity during Multiplanar-Cardiofitness Training
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    Chapter 84 Gene Specific Co-regulation Discovery: An Improved Approach
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    Chapter 85 Experimental Evaluation of Protein Secondary Structure Predictors
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    Chapter 86 Workshop on Using Emerging Parallel Architectures for Computational Science
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    Chapter 87 Solving Sparse Linear Systems on NVIDIA Tesla GPUs
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    Chapter 88 A Particle-Mesh Integrator for Galactic Dynamics Powered by GPGPUs
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    Chapter 89 Computational Science – ICCS 2009
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    Chapter 90 Fast Conjugate Gradients with Multiple GPUs
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    Chapter 91 CUDA Solutions for the SSSP Problem
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    Chapter 92 Power Consumption of GPUs from a Software Perspective
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    Chapter 93 Experiences with Mapping Non-linear Memory Access Patterns into GPUs
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    Chapter 94 Accelerated Discovery of Discrete M-Clusters/Outliers on the Raster Plane Using Graphical Processing Units
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    Chapter 95 Evaluating the Jaccard-Tanimoto Index on Multi-core Architectures
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    Chapter 96 Pairwise Distance Matrix Computation for Multiple Sequence Alignment on the Cell Broadband Engine
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    Chapter 97 Evaluation of the SUN UltraSparc T2+ Processor for Computational Science
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    Chapter 98 Streamlining Offload Computing to High Performance Architectures
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     Chapter 99 Multi-walk Parallel Pattern Search Approach on a GPU Computing Platform
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     Chapter 100 A Massively Parallel Architecture for Bioinformatics
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     Chapter 101 GPU Accelerated RNA Folding Algorithm
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     Chapter 102 Parallel Calculating of the Goal Function in Metaheuristics Using GPU