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Plant-Pathogen Interactions

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Cover of 'Plant-Pathogen Interactions'

Table of Contents

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    Book Overview
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    Chapter 1 Galaxy as a platform for identifying candidate pathogen effectors.
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    Chapter 2 Bioinformatic analysis of expression data to identify effector candidates.
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    Chapter 3 Two-Dimensional Data Binning for the Analysis of Genome Architecture in Filamentous Plant Pathogens and Other Eukaryotes
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    Chapter 4 On the statistics of identifying candidate pathogen effectors.
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    Chapter 5 High-Throughput Imaging of Plant Immune Responses
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    Chapter 6 In Vivo Protein-Protein Interaction Studies with BiFC: Conditions, Cautions, and Caveats.
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    Chapter 7 Particle bombardment-mediated transient expression to identify localization signals in plant disease resistance proteins and target sites for the proteolytic activity of pathogen effectors.
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    Chapter 8 Purification of Fungal Haustoria from Infected Plant Tissue by Flow Cytometry
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    Chapter 9 Functional characterization of nematode effectors in plants.
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    Chapter 10 Silencing of Aphid Genes by Feeding on Stable Transgenic Arabidopsis thaliana.
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    Chapter 11 Leaf-Disc Assay Based on Transient Over-Expression in Nicotiana benthamiana to Allow Functional Screening of Candidate Effectors from Aphids.
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    Chapter 12 A Growth Quantification Assay for Hyaloperonospora arabidopsidis Isolates in Arabidopsis thaliana
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    Chapter 13 Simple Quantification of In Planta Fungal Biomass
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    Chapter 14 Virus-Induced Gene Silencing and Agrobacterium tumefaciens-Mediated Transient Expression in Nicotiana tabacum
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    Chapter 15 DIGE-ABPP by Click Chemistry: Pairwise Comparison of Serine Hydrolase Activities from the Apoplast of Infected Plants.
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    Chapter 16 A Simple and Fast Protocol for the Protein Complex Immunoprecipitation (Co-IP) of Effector: Host Protein Complexes
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    Chapter 17 An Arabidopsis and Tomato Mesophyll Protoplast System for Fast Identification of Early MAMP-Triggered Immunity-Suppressing Effectors
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    Chapter 18 Production of RXLR Effector Proteins for Structural Analysis by X-Ray Crystallography
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    Chapter 19 The Do's and Don'ts of Effectoromics.
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    Chapter 20 Protoplast Cell Death Assay to Study Magnaporthe oryzae AVR Gene Function in Rice
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    Chapter 21 A Bacterial Type III Secretion-Based Delivery System for Functional Assays of Fungal Effectors in Cereals
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    Chapter 22 Genomic DNA Library Preparation for Resistance Gene Enrichment and Sequencing (RenSeq) in Plants.
Attention for Chapter 7: Particle bombardment-mediated transient expression to identify localization signals in plant disease resistance proteins and target sites for the proteolytic activity of pathogen effectors.
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Chapter title
Particle bombardment-mediated transient expression to identify localization signals in plant disease resistance proteins and target sites for the proteolytic activity of pathogen effectors.
Chapter number 7
Book title
Plant-Pathogen Interactions
Published in
Methods in molecular biology, March 2014
DOI 10.1007/978-1-62703-986-4_7
Pubmed ID
Book ISBNs
978-1-62703-985-7, 978-1-62703-986-4
Authors

Takemoto D, Jones DA, Daigo Takemoto, David A. Jones, Takemoto, Daigo, Jones, David A.

Abstract

Plant pathogens, including fungi, oomycetes, bacteria, aphids, and nematodes, produce a variety of effector proteins to counter plant disease resistance mechanisms. After delivery into the cytosol of the plant cell, effectors may target proteins localized to different compartments within the plant cell. Plants, in turn, have evolved disease resistance (R) proteins to recognize the action of effectors. Elucidation of the subcellular localization of pathogen effectors, the plant proteins they target, and plant disease resistance proteins is essential to fully understand their interactions during pathogen challenge. In recent years, expression of fluorescent protein fusions has been widely used to determine the subcellular localization of plant proteins and pathogen effectors. Use of fluorescent proteins enables researchers to monitor the dynamic behavior of proteins in living cells. Among various methods available for the introduction of genes into plant cells, particle bombardment-mediated transient expression is the most rapid method suitable for both the identification of localization signals in proteins of interest and their dissection via amino acid substitutions generated using site-directed mutagenesis. This chapter describes a rapid procedure for particle bombardment-mediated transient expression in leaf epidermal cells. This method is also applicable to detection of pathogen effector protease activities directed against target proteins in the plant cell and analysis of protease recognition sites within these target proteins.

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The data shown below were compiled from readership statistics for 14 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 14 100%

Demographic breakdown

Readers by professional status Count As %
Student > Bachelor 2 14%
Researcher 2 14%
Student > Doctoral Student 1 7%
Professor 1 7%
Lecturer > Senior Lecturer 1 7%
Other 0 0%
Unknown 7 50%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 2 14%
Arts and Humanities 1 7%
Computer Science 1 7%
Agricultural and Biological Sciences 1 7%
Unknown 9 64%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 06 November 2014.
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#20,242,136
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Outputs of similar age from Methods in molecular biology
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