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Table of Contents

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    Book Overview
  2. Altmetric Badge
    Chapter 1 A Fungal Protease Model to Interrogate Allergic Lung Immunity
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    Chapter 4 A Mouse Model of Peanut Allergy Induced by Sensitization Through the Gastrointestinal Tract
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    Chapter 5 Induction and Characterization of the Allergic Eye Disease Mouse Model
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    Chapter 6 Isolation and Purification of Epithelial and Endothelial Cells from Mouse Lung
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    Chapter 10 Determination of the Fate and Function of Innate Lymphoid Cells Following Adoptive Transfer of Innate Lymphoid Cell Precursors
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    Chapter 11 Characterization of Thymic Development of Natural Killer T Cell Subsets by Multiparameter Flow Cytometry
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    Chapter 12 Characterization of Mouse γδ T Cell Subsets in the Setting of Type-2 Immunity
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    Chapter 14 Generation of Allergen-Specific Tetramers for a Murine Model of Airway Inflammation
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    Chapter 15 The Generation and Use of Allergen-Specific TCR Transgenic Animals
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    Chapter 18 Imaging Precision-Cut Lung Slices to Visualize Leukocyte Localization and Trafficking
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    Chapter 19 Study of IgE-Producing B Cells Using the Verigem Fluorescent Reporter Mouse
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    Chapter 24 Identification of Functionally Relevant microRNAs in the Regulation of Allergic Inflammation
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    Chapter 25 The Use of Biodegradable Nanoparticles for Tolerogenic Therapy of Allergic Inflammation
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    Chapter 26 Assessing the Mouse Intestinal Microbiota in Settings of Type-2 Immune Responses
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    Chapter 28 A Consistent Method to Identify and Isolate Mononuclear Phagocytes from Human Lung and Lymph Nodes
  17. Altmetric Badge
    Chapter 30 Utilization of Air–Liquid Interface Cultures as an In Vitro Model to Assess Primary Airway Epithelial Cell Responses to the Type 2 Cytokine Interleukin-13
Attention for Chapter: A Sensitive and Integrated Approach to Profile Messenger RNA from Samples with Low Cell Numbers
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Chapter title
A Sensitive and Integrated Approach to Profile Messenger RNA from Samples with Low Cell Numbers
Book title
Type 2 Immunity
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7896-0_21
Pubmed ID
Book ISBNs
978-1-4939-7895-3, 978-1-4939-7896-0
Authors

Sandy Lisette Rosales, Shu Liang, Isaac Engel, Benjamin Joachim Schmiedel, Mitchell Kronenberg, Pandurangan Vijayanand, Grégory Seumois

Abstract

Transcriptomic profiling by RNA sequencing (RNA-Seq) represents the preferred approach to measure genome-wide gene expression for understanding cellular function, tissue development, disease pathogenesis, as well as to identify potential biomarkers and therapeutic targets. For samples with small cell numbers, multiple methods have been described to increase the efficiency of library preparation and to reduce hands-on time and costs. This chapter reviews our approach, which combines flow cytometry and the most recent high-resolution techniques to perform RNA-Seq for samples with low cell numbers as well as for single-cell samples. Our approach reduces technical variability while increasing sensitivity and efficiency. Thus, it is well-suited for large-scale gene expression profiling studies with limited samples for basic and clinical studies.

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X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 29 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 29 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 7 24%
Other 4 14%
Student > Ph. D. Student 3 10%
Student > Bachelor 2 7%
Professor 1 3%
Other 0 0%
Unknown 12 41%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 5 17%
Agricultural and Biological Sciences 3 10%
Medicine and Dentistry 3 10%
Immunology and Microbiology 2 7%
Chemistry 2 7%
Other 1 3%
Unknown 13 45%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 30 June 2018.
All research outputs
#18,640,437
of 23,092,602 outputs
Outputs from Methods in molecular biology
#7,988
of 13,207 outputs
Outputs of similar age
#330,857
of 442,643 outputs
Outputs of similar age from Methods in molecular biology
#950
of 1,499 outputs
Altmetric has tracked 23,092,602 research outputs across all sources so far. This one is in the 11th percentile – i.e., 11% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,207 research outputs from this source. They receive a mean Attention Score of 3.4. This one is in the 24th percentile – i.e., 24% of its peers scored the same or lower than it.
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We're also able to compare this research output to 1,499 others from the same source and published within six weeks on either side of this one. This one is in the 20th percentile – i.e., 20% of its contemporaries scored the same or lower than it.