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Cellular Quiescence

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Cover of 'Cellular Quiescence'

Table of Contents

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    Book Overview
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    Chapter 1 Molecular Regulation of Cellular Quiescence: A Perspective from Adult Stem Cells and Its Niches
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    Chapter 2 An In Vitro Model of Cellular Quiescence in Primary Human Dermal Fibroblasts
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    Chapter 3 Flow Cytometric Detection of G0 in Live Cells by Hoechst 33342 and Pyronin Y Staining
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    Chapter 4 Using Carboxy Fluorescein Succinimidyl Ester (CFSE) to Identify Quiescent Glioblastoma Stem-Like Cells
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    Chapter 5 Isolation of Neural Stem and Progenitor Cells from the Adult Brain and Live Imaging of Their Cell Cycle with the FUCCI System
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    Chapter 6 Determination of Histone 2B–Green Fluorescent Protein (GFP) Retention in Intestinal Stem Cells
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    Chapter 7 Detecting Hematopoietic Stem Cell Proliferation Using BrdU Incorporation
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    Chapter 8 Cell Cycle Analysis by Mass Cytometry
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    Chapter 9 Preparation and Analysis of Saccharomyces cerevisiae Quiescent Cells
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    Chapter 10 Identifying Quiescent Stem Cells in Hair Follicles
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    Chapter 11 Single EDL Myofiber Isolation for Analyses of Quiescent and Activated Muscle Stem Cells
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    Chapter 12 Investigating Cellular Quiescence of T Lymphocytes and Antigen-Induced Exit from Quiescence
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    Chapter 13 Retroviral Transduction of Quiescent Murine Hematopoietic Stem Cells
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    Chapter 14 Analysis of Murine Hematopoietic Stem Cell Proliferation During Inflammation
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    Chapter 15 A Facile, In Vitro 384-Well Plate System to Model Disseminated Tumor Cells in the Bone Marrow Microenvironment
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    Chapter 16 Distinguishing States of Arrest: Genome-Wide Descriptions of Cellular Quiescence Using ChIP-Seq and RNA-Seq Analysis
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    Chapter 17 Analysis of lncRNA-Protein Interactions by RNA-Protein Pull-Down Assays and RNA Immunoprecipitation (RIP)
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    Chapter 18 Analysis of MicroRNA-Mediated Translation Activation of In Vitro Transcribed Reporters in Quiescent Cells
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    Chapter 19 Genome-Wide Identification of Transcription Factor-Binding Sites in Quiescent Adult Neural Stem Cells
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    Chapter 20 Study Quiescence Heterogeneity by Coupling Single-Cell Measurements and Computer Modeling
Attention for Chapter 18: Analysis of MicroRNA-Mediated Translation Activation of In Vitro Transcribed Reporters in Quiescent Cells
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Chapter title
Analysis of MicroRNA-Mediated Translation Activation of In Vitro Transcribed Reporters in Quiescent Cells
Chapter number 18
Book title
Cellular Quiescence
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7371-2_18
Pubmed ID
Book ISBNs
978-1-4939-7370-5, 978-1-4939-7371-2
Authors

Syed I. A. Bukhari, Samuel S. Truesdell, Shobha Vasudevan

Abstract

Quiescence (G0) is defined as an assortment of cell cycle arrested states that exhibit distinct properties. Leukemias harbor a subpopulation of G0 cells that can be enriched by growth factor deprivation or serum starvation. Target site reporters with shortened poly(A) tails show translation activation by microRNAs, via a noncanonical mechanism, when introduced into the nucleus of G0 cells. This is because recruitment by the activation causing FXR1a-microRNA-protein complex (FXR1a-microRNP) is nuclear and requires shortened poly(A) tails to avoid repressive factors and canonical translation. When introduced into the cytoplasm, target mRNAs and microRNAs are directed toward repression rather than translation activation. Leukemic cell lines are difficult to transfect but can be routinely nucleofected-where in vitro transcribed mRNA reporters and microRNAs are introduced into the nucleus of G0 leukemic cells. Nucleofection of a microRNA target reporter and either cognate, targeting microRNA, or control microRNA, into the nucleus of G0 cells, enables analysis of translation activation by microRNAs in G0. We discuss a modified protocol that we developed for transfection of mRNAs along with microRNAs to test translation regulation by microRNAs in G0 leukemic cells.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 11 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 11 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 3 27%
Other 2 18%
Student > Master 2 18%
Student > Bachelor 1 9%
Professor > Associate Professor 1 9%
Other 0 0%
Unknown 2 18%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 5 45%
Agricultural and Biological Sciences 1 9%
Immunology and Microbiology 1 9%
Chemistry 1 9%
Unknown 3 27%