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The Plant Microbiome

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Cover of 'The Plant Microbiome'

Table of Contents

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    Book Overview
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    Chapter 1 Studying Seed Microbiomes
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    Chapter 2 Sampling Microbiomes Associated with Different Plant Compartments
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    Chapter 3 Sampling of Bacteria Associated with Plant Vascular Tissues
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    Chapter 4 Sampling of Plant Material to Study Endophytes in Small, Large, and Woody Plants
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    Chapter 5 Preparation of Samples for Characterization of Arbuscular Mycorrhizal Fungi
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    Chapter 6 Culture-based Methods for Studying the Bacterial Root Microbiome of Wheat
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    Chapter 7 Fast Screening of Bacteria for Plant Growth Promoting Traits
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    Chapter 8 Protists in the Plant Microbiome: An Untapped Field of Research
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    Chapter 9 Plant-associated Fungi: Methods for Taxonomy, Diversity, and Bioactive Secondary Metabolite Bioprospecting
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    Chapter 10 Extraction and Purification of DNA from Wood at Various Stages of Decay for Metabarcoding of Wood-Associated Fungi
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    Chapter 11 Peptide Nucleic Acid (PNA) Clamps to Reduce Co-amplification of Plant DNA During PCR Amplification of 16S rRNA Genes from Endophytic Bacteria
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    Chapter 12 Quantification of Ammonia Oxidizing Bacterial Abundances in Environmental Samples by Quantitative-PCR
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    Chapter 13 Removing Host-derived DNA Sequences from Microbial Metagenomes via Mapping to Reference Genomes
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    Chapter 14 Inference and Analysis of SPIEC-EASI Microbiome Networks
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    Chapter 15 Gene Knockout of Beneficial Plant-associated Bacillus spp. Using the CRISPR-Cas9 Double Plasmid System
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    Chapter 16 Sample Preparation for Culture-Independent Profiling and Isolation of Phyllosphere Bacteria to Identify Potential Biopesticides
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    Chapter 17 Soil-Borne Legacies of Disease in Arabidopsis thaliana
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    Chapter 18 Bioactive Streptomycetes from Isolation to Applications: A Tasmanian Potato Farm Example
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    Chapter 19 Methods to Identify Soil Microbial Bioindicators of Sustainable Management of Bioenergy Crops
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    Chapter 20 Functional Soil Biological Measurements to Support Healthy Soils
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    Chapter 21 A Bait-Trap Assay to Characterize Soil Microbes that Exhibit Chemotaxis to Root Exudates
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    Chapter 22 Methods for Root Exudate Collection and Analysis
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    Chapter 23 Collection of Sterile Root Exudates from Foliar Pathogen-Inoculated Plants
Attention for Chapter 14: Inference and Analysis of SPIEC-EASI Microbiome Networks
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Citations

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Chapter title
Inference and Analysis of SPIEC-EASI Microbiome Networks
Chapter number 14
Book title
The Plant Microbiome
Published in
Methods in molecular biology, November 2020
DOI 10.1007/978-1-0716-1040-4_14
Pubmed ID
Book ISBNs
978-1-07-161039-8, 978-1-07-161040-4
Authors

Henry W. G. Birt, Paul G. Dennis, Birt, Henry W. G., Dennis, Paul G.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 18 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 18 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 4 22%
Researcher 3 17%
Student > Bachelor 3 17%
Lecturer 1 6%
Student > Doctoral Student 1 6%
Other 3 17%
Unknown 3 17%
Readers by discipline Count As %
Agricultural and Biological Sciences 10 56%
Environmental Science 1 6%
Economics, Econometrics and Finance 1 6%
Medicine and Dentistry 1 6%
Chemistry 1 6%
Other 0 0%
Unknown 4 22%