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The Plant Microbiome

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Cover of 'The Plant Microbiome'

Table of Contents

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    Book Overview
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    Chapter 1 Studying Seed Microbiomes
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    Chapter 2 Sampling Microbiomes Associated with Different Plant Compartments
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    Chapter 3 Sampling of Bacteria Associated with Plant Vascular Tissues
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    Chapter 4 Sampling of Plant Material to Study Endophytes in Small, Large, and Woody Plants
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    Chapter 5 Preparation of Samples for Characterization of Arbuscular Mycorrhizal Fungi
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    Chapter 6 Culture-based Methods for Studying the Bacterial Root Microbiome of Wheat
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    Chapter 7 Fast Screening of Bacteria for Plant Growth Promoting Traits
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    Chapter 8 Protists in the Plant Microbiome: An Untapped Field of Research
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    Chapter 9 Plant-associated Fungi: Methods for Taxonomy, Diversity, and Bioactive Secondary Metabolite Bioprospecting
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    Chapter 10 Extraction and Purification of DNA from Wood at Various Stages of Decay for Metabarcoding of Wood-Associated Fungi
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    Chapter 11 Peptide Nucleic Acid (PNA) Clamps to Reduce Co-amplification of Plant DNA During PCR Amplification of 16S rRNA Genes from Endophytic Bacteria
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    Chapter 12 Quantification of Ammonia Oxidizing Bacterial Abundances in Environmental Samples by Quantitative-PCR
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    Chapter 13 Removing Host-derived DNA Sequences from Microbial Metagenomes via Mapping to Reference Genomes
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    Chapter 14 Inference and Analysis of SPIEC-EASI Microbiome Networks
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    Chapter 15 Gene Knockout of Beneficial Plant-associated Bacillus spp. Using the CRISPR-Cas9 Double Plasmid System
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    Chapter 16 Sample Preparation for Culture-Independent Profiling and Isolation of Phyllosphere Bacteria to Identify Potential Biopesticides
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    Chapter 17 Soil-Borne Legacies of Disease in Arabidopsis thaliana
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    Chapter 18 Bioactive Streptomycetes from Isolation to Applications: A Tasmanian Potato Farm Example
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    Chapter 19 Methods to Identify Soil Microbial Bioindicators of Sustainable Management of Bioenergy Crops
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    Chapter 20 Functional Soil Biological Measurements to Support Healthy Soils
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    Chapter 21 A Bait-Trap Assay to Characterize Soil Microbes that Exhibit Chemotaxis to Root Exudates
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    Chapter 22 Methods for Root Exudate Collection and Analysis
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    Chapter 23 Collection of Sterile Root Exudates from Foliar Pathogen-Inoculated Plants
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Title
The Plant Microbiome
Published by
Springer US, December 2020
DOI 10.1007/978-1-0716-1040-4
ISBNs
978-1-07-161039-8, 978-1-07-161040-4
Editors

Lilia C. Carvalhais, Paul G. Dennis

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