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Copy Number Variants

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Cover of 'Copy Number Variants'

Table of Contents

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    Book Overview
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    Chapter 1 Identification of Copy Number Variants from SNP Arrays Using PennCNV
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    Chapter 2 Using SAAS-CNV to Detect and Characterize Somatic Copy Number Alterations in Cancer Genomes from Next Generation Sequencing and SNP Array Data
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    Chapter 3 Statistical Detection of Genome Differences Based on CNV Segments
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    Chapter 4 Whole-Genome Shotgun Sequence CNV Detection Using Read Depth
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    Chapter 5 Read Depth Analysis to Identify CNV in Bacteria Using CNOGpro
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    Chapter 6 Using HaMMLET for Bayesian Segmentation of WGS Read-Depth Data
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    Chapter 7 Split-Read Indel and Structural Variant Calling Using PINDEL
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    Chapter 8 Detecting Small Inversions Using SRinversion
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    Chapter 9 Detection of CNVs in NGS Data Using VS-CNV
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    Chapter 10 Structural Variant Breakpoint Detection with novoBreak
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    Chapter 11 Use of RAPTR-SV to Identify SVs from Read Pairing and Split Read Signatures
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    Chapter 12 Versatile Identification of Copy Number Variants with Canvas
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    Chapter 13 A Randomized Iterative Approach for SV Discovery with SVelter
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    Chapter 14 Analysis of Population-Genetic Properties of Copy Number Variations
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    Chapter 15 Validation of Genomic Structural Variants Through Long Sequencing Technologies
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    Chapter 16 Structural Variation Detection and Analysis Using Bionano Optical Mapping
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Title
Copy Number Variants
Published by
Springer New York, January 2018
DOI 10.1007/978-1-4939-8666-8
ISBNs
978-1-4939-8665-1, 978-1-4939-8666-8
Editors

Derek M. Bickhart

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