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Plant Functional Genomics

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Cover of 'Plant Functional Genomics'

Table of Contents

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    Book Overview
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    Chapter 1 Epigenome Profiling of Specific Plant Cell Types Using a Streamlined INTACT Protocol and ChIP-seq.
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    Chapter 2 Whole-genome DNA methylation profiling with nucleotide resolution.
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    Chapter 3 High-Throughput Nuclease-Mediated Probing of RNA Secondary Structure in Plant Transcriptomes
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    Chapter 4 Genome-Wide Mapping of DNase I Hypersensitive Sites in Plants.
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    Chapter 5 Characterization of In Vivo DNA-Binding Events of Plant Transcription Factors by ChIP-seq: Experimental Protocol and Computational Analysis.
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    Chapter 6 Identification of Direct Targets of Plant Transcription Factors Using the GR Fusion Technique.
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    Chapter 7 Ribosome profiling: a tool for quantitative evaluation of dynamics in mRNA translation.
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    Chapter 8 Tissue-Specific Gene Expression Profiling by Cell Sorting
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    Chapter 9 Translating Ribosome Affinity Purification (TRAP) Followed by RNA Sequencing Technology (TRAP-SEQ) for Quantitative Assessment of Plant Translatomes.
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    Chapter 10 Rapid Immunopurification of Ribonucleoprotein Complexes of Plants
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    Chapter 11 Metabolomic profiling of plant tissues.
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    Chapter 12 Targeted Plant Genome Editing via the CRISPR/Cas9 Technology.
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    Chapter 13 QTL Mapping Using High-Throughput Sequencing
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    Chapter 14 Quantitating Plant MicroRNA-Mediated Target Repression Using a Dual-Luciferase Transient Expression System.
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    Chapter 15 Persistent virus-induced gene silencing in asymptomatic accessions of Arabidopsis.
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    Chapter 16 A User’s Guide to the Arabidopsis T-DNA Insertion Mutant Collections
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    Chapter 17 Genome-Wide Association Mapping in Plants Exemplified for Root Growth in Arabidopsis thaliana
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    Chapter 18 Tilling by sequencing.
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    Chapter 19 SHOREmap v3.0: Fast and Accurate Identification of Causal Mutations from Forward Genetic Screens
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    Chapter 20 Software-Assisted Stacking of Gene Modules Using GoldenBraid 2.0 DNA-Assembly Framework.
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    Chapter 21 Ligation-Independent Cloning for Plant Research
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    Chapter 22 Gene Functional Analysis Using Protoplast Transient Assays
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    Chapter 23 Descriptive vs. Mechanistic Network Models in Plant Development in the Post-Genomic Era.
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    Chapter 24 Analysis and visualization of RNA-Seq expression data using RStudio, Bioconductor, and Integrated Genome Browser
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    Chapter 25 Constructing simple biological networks for understanding complex high-throughput data in plants.
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Title
Plant Functional Genomics
Published by
Springer New York, March 2015
DOI 10.1007/978-1-4939-2444-8
ISBNs
978-1-4939-2443-1, 978-1-4939-2444-8
Editors

Alonso, Jose M., Stepanova, Anna N.

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X Demographics

The data shown below were collected from the profiles of 52 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 326 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 <1%
France 1 <1%
Brazil 1 <1%
Unknown 323 99%

Demographic breakdown

Readers by professional status Count As %
Researcher 73 22%
Student > Ph. D. Student 59 18%
Student > Master 36 11%
Student > Bachelor 30 9%
Student > Doctoral Student 18 6%
Other 38 12%
Unknown 72 22%
Readers by discipline Count As %
Agricultural and Biological Sciences 135 41%
Biochemistry, Genetics and Molecular Biology 85 26%
Medicine and Dentistry 7 2%
Chemistry 5 2%
Engineering 3 <1%
Other 15 5%
Unknown 76 23%