Chapter title |
A PLA-iRoCS Pipeline for the Localization of Protein–Protein Interactions In Situ
|
---|---|
Book title |
Phenotypic Screening
|
Published in |
Methods in molecular biology, January 2018
|
DOI | 10.1007/978-1-4939-7847-2_12 |
Pubmed ID | |
Book ISBNs |
978-1-4939-7846-5, 978-1-4939-7847-2
|
Authors |
Taras Pasternak, William Teale, Thorsten Falk, Benedetto Ruperti, Klaus Palme |
Abstract |
In plants as well as other organisms, protein localization alone is insufficient to provide a mechanistic link between stimulus and process regulation. This is because protein-protein interactions are central to the regulation of biological processes. However, they remain very difficult to detect in situ, with the choice of tools for the detection of protein-protein interaction in situ still in need of expansion. Here, we provide a protocol for the detection and accurate localization of protein interactions based on the combination of a whole-mount proximity ligation assay and iRoCS, a coordinate system able to standardize subtle differences between the architecture of individual Arabidopsis roots. |
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