↓ Skip to main content

Chromatin Immunoprecipitation

Overview of attention for book
Cover of 'Chromatin Immunoprecipitation'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 ChIP and ChIP-Related Techniques: Expanding the Fields of Application and Improving ChIP Performance
  3. Altmetric Badge
    Chapter 2 Considerations on Experimental Design and Data Analysis of Chromatin Immunoprecipitation Experiments
  4. Altmetric Badge
    Chapter 3 How to Combine ChIP with qPCR
  5. Altmetric Badge
    Chapter 4 Analysis of Protein–DNA Interaction by Chromatin Immunoprecipitation and DNA Tiling Microarray (ChIP-on-chip)
  6. Altmetric Badge
    Chapter 5 Chromatin Immunoprecipitation from Mouse Embryonic Tissue or Adherent Cells in Culture, Followed by Next-Generation Sequencing
  7. Altmetric Badge
    Chapter 6 Chromatin RNA Immunoprecipitation (ChRIP)
  8. Altmetric Badge
    Chapter 7 DNA Accessibility by MNase Digestions
  9. Altmetric Badge
    Chapter 8 Characterization of the Nucleosome Landscape by Micrococcal Nuclease-Sequencing (MNase-seq)
  10. Altmetric Badge
    Chapter 9 ChIP-re-ChIP: Co-occupancy Analysis by Sequential Chromatin Immunoprecipitation
  11. Altmetric Badge
    Chapter 10 Sm-ChIPi: Single-Molecule Chromatin Immunoprecipitation Imaging
  12. Altmetric Badge
    Chapter 11 Chromatin Immunoprecipitation of Skeletal Muscle Tissue
  13. Altmetric Badge
    Chapter 12 Chromatin Immunoprecipitation Assay in the Hyperthermoacidophilic Crenarchaeon, Sulfolobus acidocaldarius
  14. Altmetric Badge
    Chapter 13 Using Intra-ChIP to Measure Protein–DNA Interactions in Intracellular Pathogens
  15. Altmetric Badge
    Chapter 14 Native Chromatin Immunoprecipitation-Sequencing (ChIP-Seq) from Low Cell Numbers
  16. Altmetric Badge
    Chapter 15 MOBE-ChIP: Probing Cell Type-Specific Binding Through Large-Scale Chromatin Immunoprecipitation
  17. Altmetric Badge
    Chapter 16 Multiplexed ChIP-Seq Using Direct Nucleosome Barcoding: A Tool for High-Throughput Chromatin Analysis
  18. Altmetric Badge
    Chapter 17 Analysis of ChIP-seq Data in R/Bioconductor
  19. Altmetric Badge
    Chapter 18 Spike-In Normalization of ChIP Data Using DNA–DIG–Antibody Complex
Attention for Chapter 3: How to Combine ChIP with qPCR
Altmetric Badge

About this Attention Score

  • Above-average Attention Score compared to outputs of the same age (55th percentile)
  • High Attention Score compared to outputs of the same age and source (83rd percentile)

Mentioned by

wikipedia
1 Wikipedia page

Citations

dimensions_citation
2 Dimensions

Readers on

mendeley
40 Mendeley
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Chapter title
How to Combine ChIP with qPCR
Chapter number 3
Book title
Chromatin Immunoprecipitation
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7380-4_3
Pubmed ID
Book ISBNs
978-1-4939-7379-8, 978-1-4939-7380-4
Authors

Patrik Asp, Asp, Patrik

Abstract

Chromatin immunoprecipitation (ChIP) coupled with quantitative PCR (qPCR) has in the last 15 years become a basic mainstream tool in genomic research. Numerous commercially available ChIP kits, qPCR kits, and real-time PCR systems allow for quick and easy analysis of virtually anything chromatin-related as long as there is an available antibody. However, the highly accurate quantitative dimension added by using qPCR to analyze ChIP samples significantly raises the bar in terms of experimental accuracy, appropriate controls, data analysis, and data presentation. This chapter will address these potential pitfalls by providing protocols and procedures that address the difficulties inherent in ChIP-qPCR assays.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 40 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 40 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 8 20%
Student > Bachelor 7 18%
Student > Ph. D. Student 5 13%
Other 3 8%
Student > Master 3 8%
Other 2 5%
Unknown 12 30%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 17 43%
Agricultural and Biological Sciences 6 15%
Immunology and Microbiology 2 5%
Mathematics 1 3%
Pharmacology, Toxicology and Pharmaceutical Science 1 3%
Other 2 5%
Unknown 11 28%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 09 May 2020.
All research outputs
#7,542,164
of 23,009,818 outputs
Outputs from Methods in molecular biology
#2,339
of 13,157 outputs
Outputs of similar age
#153,692
of 442,310 outputs
Outputs of similar age from Methods in molecular biology
#230
of 1,498 outputs
Altmetric has tracked 23,009,818 research outputs across all sources so far. This one is in the 44th percentile – i.e., 44% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,157 research outputs from this source. They receive a mean Attention Score of 3.4. This one has done well, scoring higher than 76% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 442,310 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 55% of its contemporaries.
We're also able to compare this research output to 1,498 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 83% of its contemporaries.