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Chromosomal Mutagenesis

Overview of attention for book
Chromosomal Mutagenesis
Springer New York

Table of Contents

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    Book Overview
  2. Altmetric Badge
    Chapter 1 Genome Editing by Targeted Chromosomal Mutagenesis.
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    Chapter 2 piggyBac Transposon-Based Insertional Mutagenesis in Mouse Haploid Embryonic Stem Cells.
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    Chapter 3 Using phage integrases in a site-specific dual integrase cassette exchange strategy.
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    Chapter 4 Therapeutic Genome Mutagenesis Using Synthetic Donor DNA and Triplex-Forming Molecules
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    Chapter 5 Genome Engineering Using Adeno-Associated Virus (AAV).
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    Chapter 6 Engineering of Customized Meganucleases via In Vitro Compartmentalization and In Cellulo Optimization
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    Chapter 7 Efficient Design and Assembly of Custom TALENs Using the Golden Gate Platform
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    Chapter 8 Ligation-Independent Cloning (LIC) Assembly of TALEN Genes
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    Chapter 9 Assembly and Characterization of megaTALs for Hyperspecific Genome Engineering Applications
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    Chapter 10 Genome Engineering Using CRISPR-Cas9 System
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    Chapter 11 Donor Plasmid Design for Codon and Single Base Genome Editing Using Zinc Finger Nucleases.
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    Chapter 12 Endogenous Gene Tagging with Fluorescent Proteins.
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    Chapter 13 Silencing Long Noncoding RNAs with Genome-Editing Tools
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    Chapter 14 Gene Editing Using ssODNs with Engineered Endonucleases.
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    Chapter 15 Genome Editing in Human Pluripotent Stem Cells Using Site-Specific Nucleases
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    Chapter 16 Strategies to Increase Genome Editing Frequencies and to Facilitate the Identification of Edited Cells
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    Chapter 17 Using Engineered Endonucleases to Create Knockout and Knockin Zebrafish Models.
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    Chapter 18 Creating Knockout and Knockin Rodents Using Engineered Endonucleases via Direct Embryo Injection.
  20. Altmetric Badge
    Chapter 19 Simple Sperm Preservation by Freeze-Drying for Conserving Animal Strains
Attention for Chapter 14: Gene Editing Using ssODNs with Engineered Endonucleases.
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  • Above-average Attention Score compared to outputs of the same age and source (57th percentile)

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Chapter title
Gene Editing Using ssODNs with Engineered Endonucleases.
Chapter number 14
Book title
Chromosomal Mutagenesis
Published in
Methods in molecular biology, January 2015
DOI 10.1007/978-1-4939-1862-1_14
Pubmed ID
Book ISBNs
978-1-4939-1861-4, 978-1-4939-1862-1
Authors

Fuqiang Chen, Shondra M Pruett-Miller, Gregory D Davis, Shondra M. Pruett-Miller, Gregory D. Davis

Abstract

Gene editing using engineered endonucleases, such as zinc finger nucleases (ZFNs), transcription activator-like effector nucleases (TALENs), and clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 nucleases, requires the creation of a targeted, chromosomal DNA double-stranded break (DSB). In mammalian cells, these DSBs are typically repaired by one of the two major DNA repair pathways: nonhomologous end joining (NHEJ) or homology-directed repair (HDR). NHEJ is an error-prone repair process that can result in a wide range of end-joining events that leads to somewhat random mutations at the site of DSB. HDR is a precise repair pathway that can utilize either an endogenous or exogenous piece of homologous DNA as a template or "donor" for repair. Traditional gene editing via HDR has relied on the co-delivery of a targeted, engineered endonuclease and a circular plasmid donor construct. More recently, it has been shown that single-stranded oligodeoxynucleotides (ssODNs) can also serve as DNA donors and thus obviate the more laborious and time-consuming plasmid vector construction process. Here we describe the use of ssODNs for making defined genome modifications in combination with engineered endonucleases.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 45 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 45 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 13 29%
Researcher 12 27%
Student > Master 4 9%
Student > Bachelor 3 7%
Student > Doctoral Student 2 4%
Other 7 16%
Unknown 4 9%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 17 38%
Agricultural and Biological Sciences 16 36%
Medicine and Dentistry 2 4%
Business, Management and Accounting 1 2%
Pharmacology, Toxicology and Pharmaceutical Science 1 2%
Other 1 2%
Unknown 7 16%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 11 July 2015.
All research outputs
#15,310,749
of 22,771,140 outputs
Outputs from Methods in molecular biology
#5,318
of 13,090 outputs
Outputs of similar age
#208,773
of 352,903 outputs
Outputs of similar age from Methods in molecular biology
#343
of 996 outputs
Altmetric has tracked 22,771,140 research outputs across all sources so far. This one is in the 22nd percentile – i.e., 22% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,090 research outputs from this source. They receive a mean Attention Score of 3.3. This one is in the 45th percentile – i.e., 45% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 352,903 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 31st percentile – i.e., 31% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 996 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 57% of its contemporaries.