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Synthetic Gene Networks

Overview of attention for book
Cover of 'Synthetic Gene Networks'

Table of Contents

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    Book Overview
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    Chapter 1 In silico implementation of synthetic gene networks.
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    Chapter 2 Standardization in synthetic biology.
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    Chapter 3 Robust Optimal Design of Synthetic Biological Networks
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    Chapter 4 Predicting synthetic gene networks.
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    Chapter 5 Reprogramming a GFP Reporter Gene Subjects It to Complex Lentiviral Gene Regulation
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    Chapter 6 Synthetic Gene Networks
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    Chapter 7 Identifying and Optimizing Intracellular Protein–Protein Interactions Using Bacterial Genetic Selection
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    Chapter 8 Zinc-finger nucleases-based genome engineering to generate isogenic human cell lines.
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    Chapter 9 RNA-Based Networks: Using RNA Aptamers and Ribozymes as Synthetic Genetic Devices
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    Chapter 10 MicroRNA Circuits for Transcriptional Logic.
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    Chapter 11 Light-regulated gene expression in yeast.
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    Chapter 12 Light-controlled gene switches in Mammalian cells.
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    Chapter 13 Expressed protein modifications: making synthetic proteins.
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    Chapter 14 Using Transcription Machinery Engineering to Elicit Complex Cellular Phenotypes
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    Chapter 15 Streamlining of a Pseudomonas putida Genome Using a Combinatorial Deletion Method Based on Minitransposon Insertion and the Flp-FRT Recombination System
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    Chapter 16 Transposon-based and plasmid-based genetic tools for editing genomes of gram-negative bacteria.
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    Chapter 17 Synthetic Networks: Oscillators and Toggle Switches for Escherichia coli
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    Chapter 18 Studying Microbial Communities in Biofilms
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    Chapter 19 Quantitative analysis of the spatiotemporal dynamics of a synthetic predator-prey ecosystem.
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    Chapter 20 Drosophila s2 schneider cells: a useful tool for rebuilding and redesigning approaches in synthetic biology.
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    Chapter 21 Synthetic gene networks in plant systems.
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    Chapter 22 Design and Construction of Synthetic Gene Networks in Mammalian Cells
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    Chapter 23 Synthetic gene networks as blueprint for smart hydrogels.
Attention for Chapter 5: Reprogramming a GFP Reporter Gene Subjects It to Complex Lentiviral Gene Regulation
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Chapter title
Reprogramming a GFP Reporter Gene Subjects It to Complex Lentiviral Gene Regulation
Chapter number 5
Book title
Synthetic Gene Networks
Published in
Methods in molecular biology, January 2012
DOI 10.1007/978-1-61779-412-4_5
Pubmed ID
Book ISBNs
978-1-61779-411-7, 978-1-61779-412-4
Authors

Frank Notka, Ralf Wagner

Abstract

Late human immunodeficiency virus (HIV)-derived RNAs encoding relevant therapeutic targets or promising vaccine compounds, such as the HIV-1 group-specific antigen (Gag), are translocated from the nucleus into the cytoplasm via sophisticated export machinery. Relevant steps include the concerted action of several cis-acting RNA elements with the viral Rev-shuttle protein and several cellular components (Ran1/Exportin; Crm1). Based on detailed understanding of the molecular mechanisms guiding this complex process, we used rational codon usage modification to design and reprogram a GFP encoding reporter RNA now exactly mimicking the complex transcriptional and posttranscriptional regulation of late lentiviral mRNAs.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 5 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 20%
Germany 1 20%
Unknown 3 60%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 2 40%
Professor 1 20%
Researcher 1 20%
Student > Doctoral Student 1 20%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 2 40%
Agricultural and Biological Sciences 2 40%
Medicine and Dentistry 1 20%