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Environmental Microbiology

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Cover of 'Environmental Microbiology'

Table of Contents

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    Book Overview
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    Chapter 1 Environmental Microbiology
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    Chapter 2 Rapid Extraction of PCR-Competent DNA from Recalcitrant Environmental Samples
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    Chapter 3 Quantitative PCR for Detection of mRNA and gDNA in Environmental Isolates.
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    Chapter 4 Analysis of Community Dynamics in Environmental Samples Using Denaturing Gradient Gel Electrophoresis
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    Chapter 5 Terminal Restriction Fragment Length Polymorphism (T-RFLP) Profiling of Bacterial 16S rRNA Genes
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    Chapter 6 Environmental Microbiology
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    Chapter 7 Human Fecal Source Identification with Real-Time Quantitative PCR
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    Chapter 8 Next Generation Barcode Tagged Sequencing for Monitoring Microbial Community Dynamics
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    Chapter 9 Analysis of Methanotroph Community Structure Using a pmoA-Based Microarray.
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    Chapter 10 Biolog Phenotype MicroArrays for Phenotypic Characterization of Microbial Cells.
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    Chapter 11 Visualization of Metabolic Properties of Bacterial Cells Using Nanoscale Secondary Ion Mass Spectrometry (NanoSIMS)
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    Chapter 12 Environmental Microbiology
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    Chapter 13 Environmental Microbiology
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    Chapter 14 Stable Isotope Probing to Study Functional Components of Complex Microbial Ecosystems
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    Chapter 15 Metagenomics Using Next-Generation Sequencing
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    Chapter 16 Targeted Genomics of Flow Cytometrically Sorted Cultured and Uncultured Microbial Groups
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    Chapter 17 Quantitative microbial metatranscriptomics.
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    Chapter 18 Quantitative metaproteomics: functional insights into microbial communities.
Attention for Chapter 10: Biolog Phenotype MicroArrays for Phenotypic Characterization of Microbial Cells.
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Chapter title
Biolog Phenotype MicroArrays for Phenotypic Characterization of Microbial Cells.
Chapter number 10
Book title
Environmental Microbiology
Published in
Methods in molecular biology, January 2014
DOI 10.1007/978-1-62703-712-9_10
Pubmed ID
Book ISBNs
978-1-62703-711-2, 978-1-62703-712-9
Authors

Mackie AM, Hassan KA, Paulsen IT, Tetu SG, Amanda M. Mackie, Karl A. Hassan, Ian T. Paulsen, Sasha G. Tetu, Mackie, Amanda M, Hassan, Karl A, Paulsen, Ian T, Tetu, Sasha G, Mackie, Amanda M., Hassan, Karl A., Paulsen, Ian T., Tetu, Sasha G.

Editors

Ian T. Paulsen, Andrew J. Holmes

Abstract

Biolog Phenotype MicroArrays for microorganisms provide a high-throughput method for the global analysis of microbial growth phenotypes. Using a colorimetric reaction that is indicative of respiration, these microplate assays measure the response of an individual strain or microbial community to a large and diverse range of nutrients and chemicals. Phenotype MicroArrays have been used to study gene function and to improve genome annotation in single microorganisms and for physiological profiling of bacterial communities. The microplate system can be used to obtain a comprehensive overview of metabolic capability, or it can be tailored, through the use of subsets of plates, to address specific research needs.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 61 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
New Zealand 1 2%
Unknown 60 98%

Demographic breakdown

Readers by professional status Count As %
Student > Master 11 18%
Student > Bachelor 11 18%
Researcher 10 16%
Student > Ph. D. Student 7 11%
Student > Doctoral Student 3 5%
Other 6 10%
Unknown 13 21%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 18 30%
Agricultural and Biological Sciences 16 26%
Immunology and Microbiology 6 10%
Chemical Engineering 1 2%
Nursing and Health Professions 1 2%
Other 3 5%
Unknown 16 26%