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Environmental Microbiology

Overview of attention for book
Cover of 'Environmental Microbiology'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Environmental Microbiology
  3. Altmetric Badge
    Chapter 2 Rapid Extraction of PCR-Competent DNA from Recalcitrant Environmental Samples
  4. Altmetric Badge
    Chapter 3 Quantitative PCR for Detection of mRNA and gDNA in Environmental Isolates.
  5. Altmetric Badge
    Chapter 4 Analysis of Community Dynamics in Environmental Samples Using Denaturing Gradient Gel Electrophoresis
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    Chapter 5 Terminal Restriction Fragment Length Polymorphism (T-RFLP) Profiling of Bacterial 16S rRNA Genes
  7. Altmetric Badge
    Chapter 6 Environmental Microbiology
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    Chapter 7 Human Fecal Source Identification with Real-Time Quantitative PCR
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    Chapter 8 Next Generation Barcode Tagged Sequencing for Monitoring Microbial Community Dynamics
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    Chapter 9 Analysis of Methanotroph Community Structure Using a pmoA-Based Microarray.
  11. Altmetric Badge
    Chapter 10 Biolog Phenotype MicroArrays for Phenotypic Characterization of Microbial Cells.
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    Chapter 11 Visualization of Metabolic Properties of Bacterial Cells Using Nanoscale Secondary Ion Mass Spectrometry (NanoSIMS)
  13. Altmetric Badge
    Chapter 12 Environmental Microbiology
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    Chapter 13 Environmental Microbiology
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    Chapter 14 Stable Isotope Probing to Study Functional Components of Complex Microbial Ecosystems
  16. Altmetric Badge
    Chapter 15 Metagenomics Using Next-Generation Sequencing
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    Chapter 16 Targeted Genomics of Flow Cytometrically Sorted Cultured and Uncultured Microbial Groups
  18. Altmetric Badge
    Chapter 17 Quantitative microbial metatranscriptomics.
  19. Altmetric Badge
    Chapter 18 Quantitative metaproteomics: functional insights into microbial communities.
Attention for Chapter 2: Rapid Extraction of PCR-Competent DNA from Recalcitrant Environmental Samples
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Chapter title
Rapid Extraction of PCR-Competent DNA from Recalcitrant Environmental Samples
Chapter number 2
Book title
Environmental Microbiology
Published in
Methods in molecular biology, January 2014
DOI 10.1007/978-1-62703-712-9_2
Pubmed ID
Book ISBNs
978-1-62703-711-2, 978-1-62703-712-9
Authors

Michael R. Gillings, Gillings MR, Gillings, Michael R, Gillings, Michael R.

Abstract

Advances in sequencing technologies have made the investigation of microbial ecology and community dynamics more tractable. The critical first step in such analyses is the efficient and representative recovery of PCR-competent DNA from complex environmental samples. All extraction protocols contain inherent biases, meaning that choice of method involves compromise between various factors, including efficiency, yield, universality, and representative extraction. Here, details are given for a routine method used in our laboratory to extract DNA from soils, sediments, biofilms, roots, and fungi.

X Demographics

X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 21 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Spain 1 5%
Unknown 20 95%

Demographic breakdown

Readers by professional status Count As %
Researcher 6 29%
Student > Master 5 24%
Student > Ph. D. Student 3 14%
Professor 1 5%
Professor > Associate Professor 1 5%
Other 1 5%
Unknown 4 19%
Readers by discipline Count As %
Agricultural and Biological Sciences 8 38%
Biochemistry, Genetics and Molecular Biology 3 14%
Environmental Science 3 14%
Engineering 2 10%
Medicine and Dentistry 1 5%
Other 0 0%
Unknown 4 19%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 15 February 2014.
All research outputs
#18,365,132
of 22,745,803 outputs
Outputs from Methods in molecular biology
#7,863
of 13,090 outputs
Outputs of similar age
#229,336
of 305,223 outputs
Outputs of similar age from Methods in molecular biology
#294
of 597 outputs
Altmetric has tracked 22,745,803 research outputs across all sources so far. This one is in the 11th percentile – i.e., 11% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,090 research outputs from this source. They receive a mean Attention Score of 3.3. This one is in the 24th percentile – i.e., 24% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 305,223 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 13th percentile – i.e., 13% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 597 others from the same source and published within six weeks on either side of this one. This one is in the 32nd percentile – i.e., 32% of its contemporaries scored the same or lower than it.