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ATM Kinase

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ATM Kinase
Springer New York

Table of Contents

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    Book Overview
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    Chapter 1 Assaying Radiosensitivity of Ataxia-Telangiectasia
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    Chapter 2 Assaying for Radioresistant DNA Synthesis, the Hallmark Feature of the Intra-S-Phase Checkpoint Using a DNA Fiber Technique
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    Chapter 3 ATM Gene Mutation Detection Techniques and Functional Analysis
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    Chapter 4 An HTRF® Assay for the Protein Kinase ATM
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    Chapter 5 ATM Kinase Inhibitors: HTS Cellular Imaging Assay Using Cellomics™ ArrayScan VTI Platform
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    Chapter 6 Image-Based High Content Screening: Automating the Quantification Process for DNA Damage-Induced Foci
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    Chapter 7 Analyzing ATM Function by Electroporation of Endonucleases and Immunofluorescence Microscopy
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    Chapter 8 Quantitative and Dynamic Imaging of ATM Kinase Activity by Bioluminescence Imaging
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    Chapter 9 Zn(II)–Phos-Tag SDS-PAGE for Separation and Detection of a DNA Damage-Related Signaling Large Phosphoprotein
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    Chapter 10 Identification of ATM Protein Kinase Phosphorylation Sites by Mass Spectrometry
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    Chapter 11 Studies of ATM Kinase Activity Using Engineered ATM Sensitive to ATP Analogues (ATM-AS)
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    Chapter 12 Functional Characterization of ATM Kinase Using Acetylation-Specific Antibodies
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    Chapter 13 Identification of ATM-Interacting Proteins by Co-immunoprecipitation and Glutathione-S-Transferase (GST) Pull-Down Assays
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    Chapter 14 ATM Activation and H2AX Phosphorylation Induced by Genotoxic Agents Assessed by Flow- and Laser Scanning Cytometry
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    Chapter 15 Peptide Immunoaffinity Enrichment with Targeted Mass Spectrometry: Application to Quantification of ATM Kinase Phospho-Signaling
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    Chapter 16 Mass Spectrometry-Based Proteomics for Quantifying DNA Damage-Induced Phosphorylation
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    Chapter 17 Statistical Analysis of ATM-Dependent Signaling in Quantitative Mass Spectrometry Phosphoproteomics
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    Chapter 18 ChIP Technique to Study Protein Dynamics at Defined DNA Double Strand Breaks
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    Chapter 19 Studies of the DNA Damage Response by Using the Lac Operator/Repressor (LacO/LacR) Tethering System
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    Chapter 20 Imaging of Fluorescently Tagged ATM Kinase at the Sites of DNA Double Strand Breaks
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    Chapter 21 Live Cell Imaging to Study Real-Time ATM-Mediated Recruitment of DNA Repair Complexes to Sites of Ionizing Radiation-Induced DNA Damage
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    Chapter 22 Analyzing Heterochromatic DNA Double Strand Break (DSB) Repair in Response to Ionizing Radiation
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    Chapter 23 Phenotypic Analysis of ATM Protein Kinase in DNA Double-Strand Break Formation and Repair
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    Chapter 24 Monitoring DNA Repair Consequences of ATM Signaling Using Simultaneous Fluorescent Readouts
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    Chapter 25 Noncanonical ATM Activation and Signaling in Response to Transcription-Blocking DNA Damage
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    Chapter 26 Study of ATM Phosphorylation by Cdk5 in Neuronal Cells
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    Chapter 27 DNA Damage Response in Human Stem Cells and Neural Descendants
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    Chapter 28 A Patient-Specific Stem Cell Model to Investigate the Neurological Phenotype Observed in Ataxia-Telangiectasia
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    Chapter 29 Lentiviral Reprogramming of A-T Patient Fibroblasts to Induced Pluripotent Stem Cells
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    Chapter 30 Monitoring the ATM-Mediated DNA Damage Response in the Cerebellum Using Organotypic Cultures
Attention for Chapter 14: ATM Activation and H2AX Phosphorylation Induced by Genotoxic Agents Assessed by Flow- and Laser Scanning Cytometry
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Chapter title
ATM Activation and H2AX Phosphorylation Induced by Genotoxic Agents Assessed by Flow- and Laser Scanning Cytometry
Chapter number 14
Book title
ATM Kinase
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-6955-5_14
Pubmed ID
Book ISBNs
978-1-4939-6953-1, 978-1-4939-6955-5
Authors

Hong Zhao, H. Dorota Halicka, Jorge Garcia, Jiangwei Li, Zbigniew Darzynkiewicz

Editors

Sergei V. Kozlov

Abstract

Activation of Ataxia Telangiectasia Mediated protein kinase (ATM) by its phosphorylation on serine 1981 and phosphorylation of histone H2AX on serine 139 (γH2AX) are the key events reporting DNA damage, primarily formation of DNA double strand breaks. These events are detected immunocytochemically in individual cells using phospho-specific Abs. The protocols are presented that describe the methodology of immunofluorescent labeling of cells in conjunction with specific staining of cellular DNA. Flow- and imaging-cytometry, the latter exemplified as laser scanning cytometry, is used to quantify intensity of cellular fluorescence reporting activation of ATM and induction of γH2AX with respect to cellular DNA content, which in turn reports the cell cycle phase. Different protocols are presented for analysis of cells either grown in suspension or attached to surface of culture vessels. Examples of ATM activation and H2AX phosphorylation in response to DNA damage in leukemic HL-60 cells by DNA topoisomerase I inhibitor topotecan, and in lung carcinoma A549 cells by hydrogen peroxide, are presented.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 4 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 4 100%

Demographic breakdown

Readers by professional status Count As %
Professor 1 25%
Student > Ph. D. Student 1 25%
Student > Master 1 25%
Unknown 1 25%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 1 25%
Agricultural and Biological Sciences 1 25%
Chemistry 1 25%
Unknown 1 25%