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Protein Arginylation

Overview of attention for book
Cover of 'Protein Arginylation'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Protein Arginylation: Milestones of Discovery
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    Chapter 2 Recollection of How We Came Across the Protein Modification with Amino Acids by Aminoacyl tRNA-Protein Transferase
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    Chapter 3 Arginyltransferase: A Personal and Historical Perspective
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    Chapter 4 Arginylation in a Partially Purified Fraction of 150 k xg Supernatants of Axoplasm and Injured Vertebrate Nerves.
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    Chapter 5 Preparation of ATE1 Enzyme from Native Mammalian Tissues
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    Chapter 6 Correlated Measurement of Endogenous ATE1 Activity on Native Acceptor Proteins in Tissues and Cultured Cells to Detect Cellular Aging
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    Chapter 7 Assaying the Posttranslational Arginylation of Proteins in Cultured Cells
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    Chapter 8 Assaying ATE1 Activity in Yeast by β-Gal Degradation
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    Chapter 9 Assaying Arginylation Activity in Cell Lysates Using a Fluorescent Reporter
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    Chapter 10 Assaying Intracellular Arginylation Activity Using a Fluorescent Reporter
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    Chapter 11 Bacterial Expression and Purification of Recombinant Arginyltransferase (ATE1) and Arg-tRNA Synthetase (RRS) for Arginylation Assays
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    Chapter 12 Preparation of tRNAArg for Arginylation Assay by In Vitro Transcription
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    Chapter 13 Preparation of an Enriched tRNAArg Fraction for Arginylation by Expression in E. coli
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    Chapter 14 Enzymatic Aminoacylation of tRNAArg Using Recombinant Arg-tRNA Synthetase
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    Chapter 15 Assaying ATE1 Activity In Vitro
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    Chapter 16 High-Throughput Arginylation Assay in Microplate Format
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    Chapter 17 Assaying for Arginyltransferase Activity and Specificity by Peptide Arrays
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    Chapter 18 Assay of Arginyltransferase Activity by a Fluorescent HPLC Method
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    Chapter 19 Identification of Arginylated Proteins by Mass Spectrometry
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    Chapter 20 Analysis of Arginylated Peptides by Subtractive Edman Degradation
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    Chapter 21 Transferase-Mediated Labeling of Protein N-Termini with Click Chemistry Handles
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    Chapter 22 Synthesis of Peptides and Proteins with Site-Specific Glutamate Arginylation
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    Chapter 23 Reconstitution of the Arginyltransferase (ATE1) Iron-Sulfur Cluster.
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    Chapter 24 N-Terminal Arginylation Pull-down Analysis Using the R-Catcher Tool
  26. Altmetric Badge
    Chapter 25 Identification of Protein Arginylation by Encapsulated N-Terminal Peptide Enrichment Method
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    Chapter 26 Monitoring the Activation of Selective Autophagy via N-Terminal Arginylation
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    Chapter 27 Analyzing the Interaction of Arginylated Proteins and Nt-Arg-Mimicking Chemical Compounds to N-Recognins
  29. Altmetric Badge
    Chapter 28 Synthesis of Stably Charged Arg-tRNAArg for Structural Analysis
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    Chapter 29 A High-Throughput Colorimetric Microplate Assay for Determination of Plasma Arginase Activity
  31. Altmetric Badge
    Chapter 30 Development of New Tools for the Studies of Protein Arginylation
Attention for Chapter 23: Reconstitution of the Arginyltransferase (ATE1) Iron-Sulfur Cluster.
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About this Attention Score

  • Above-average Attention Score compared to outputs of the same age (61st percentile)
  • High Attention Score compared to outputs of the same age and source (86th percentile)

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Chapter title
Reconstitution of the Arginyltransferase (ATE1) Iron-Sulfur Cluster.
Chapter number 23
Book title
Protein Arginylation
Published in
Methods in molecular biology, January 2023
DOI 10.1007/978-1-0716-2942-0_23
Pubmed ID
Book ISBNs
978-1-07-162941-3, 978-1-07-162942-0
Authors

Van, Verna, Smith, Aaron T, Smith, Aaron T.

Abstract

As global regulators of eukaryotic homeostasis, arginyltransferases (ATE1s) have essential functions within the cell. Thus, the regulation of ATE1 is paramount. It was previously postulated that ATE1 was a hemoprotein and that heme was an operative cofactor responsible for enzymatic regulation and inactivation. However, we have recently shown that ATE1 instead binds an iron-sulfur ([Fe-S]) cluster that appears to function as an oxygen sensor to regulate ATE1 activity. As this cofactor is oxygen-sensitive, purification of ATE1 in the presence of O2 results in cluster decomposition and loss. Here, we describe an anoxic chemical reconstitution protocol to assemble the [Fe-S] cluster cofactor in Saccharomyces cerevisiae ATE1 (ScATE1) and Mus musculus ATE1 isoform 1 (MmATE1-1).

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X Demographics

The data shown below were collected from the profiles of 6 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 2 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 2 100%

Demographic breakdown

Readers by professional status Count As %
Professor > Associate Professor 1 50%
Unknown 1 50%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 1 50%
Unknown 1 50%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 08 April 2023.
All research outputs
#14,566,387
of 25,658,139 outputs
Outputs from Methods in molecular biology
#3,713
of 14,319 outputs
Outputs of similar age
#181,468
of 478,901 outputs
Outputs of similar age from Methods in molecular biology
#86
of 714 outputs
Altmetric has tracked 25,658,139 research outputs across all sources so far. This one is in the 42nd percentile – i.e., 42% of other outputs scored the same or lower than it.
So far Altmetric has tracked 14,319 research outputs from this source. They receive a mean Attention Score of 3.4. This one has gotten more attention than average, scoring higher than 73% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 478,901 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 61% of its contemporaries.
We're also able to compare this research output to 714 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 86% of its contemporaries.