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The Ubiquitin Code

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Cover of 'The Ubiquitin Code'

Table of Contents

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    Book Overview
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    Chapter 1 Thioester and Oxyester Linkages in the Ubiquitin System
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    Chapter 2 Getting to the Root of Branched Ubiquitin Chains: A Review of Current Methods and Functions
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    Chapter 3 Chemical Synthesis of Non-hydrolyzable Ubiquitin(-Like) Hybrid Chains
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    Chapter 4 Total Linear Chemical Synthesis of LC3A and LC3B
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    Chapter 5 A Microbead-Based Flow Cytometry Assay to Assess the Activity of Ubiquitin and Ubiquitin-Like Conjugating Enzymes
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    Chapter 6 Monitoring HECT Ubiquitination Activity In Vitro
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    Chapter 7 RNAi-Based Screening for the Identification of Specific Substrate-Deubiquitinase Pairs
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    Chapter 8 Strategies for Monitoring “Ubiquitin C-Terminal Hydrolase 1” (Yuh1) Activity
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    Chapter 9 Isolation and Mass Spectrometry Identification of K48 and K63 Ubiquitin Proteome Using Chain-Specific Nanobodies
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    Chapter 10 A Mass Spectrometry-Based Strategy for Mapping Modification Sites for the Ubiquitin-Like Modifier NEDD8
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    Chapter 11 Isolation of the Hepatic Ubiquitome/NEDDylome by Streptavidin Pull-Down Assay in the Biotinylated Ubiquitin (bioUb)/Biotinylated NEDD8 (bioNEDD8) Transgenic Mice
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    Chapter 12 The Lambda Display Technology: A Useful Tool for the Identification of Ubiquitin-and Ubiquitin-Like-Binding Domains
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    Chapter 13 SUMO-ID: A Strategy for the Identification of SUMO-Dependent Proximal Interactors
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    Chapter 14 Analysis of ATG8 Family Members Using LC3-Interacting Regions (LIR)-Based Molecular Traps
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    Chapter 15 A Computational Tool for Analysis of Mass Spectrometry Data of Ubiquitin-Enriched Samples
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    Chapter 16 In-Plate and In-Gel Assays for the Assessment of Proteasome Activity in  Caenorhabditis elegans
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    Chapter 17 Isolation of Proteasome-Trapped Peptides (PTPs) for Degradome Analysis
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