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Field Guidelines for Genetic Experimental Designs in High-Throughput Sequencing

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Cover of 'Field Guidelines for Genetic Experimental Designs in High-Throughput Sequencing'

Table of Contents

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    Book Overview
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    Chapter 1 The High-Throughput Sequencing Technologies Triple-W Discussion: Why Use HTS, What Is the Optimal HTS Method to Use, and Which Data Analysis Workflow to Follow
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    Chapter 2 Whole-Genome Sequencing Recommendations
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    Chapter 3 Targeted DNA Region Re-sequencing
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    Chapter 4 Transcriptome Profiling Strategies
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    Chapter 5 Differential mRNA Alternative Splicing
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    Chapter 6 microRNA Discovery and Expression Analysis in Animals
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    Chapter 7 Analysis of Long Noncoding RNAs in RNA-Seq Data
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    Chapter 8 Ribosome Profiling
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    Chapter 9 Genome-Wide Analysis of DNA Methylation Patterns by High-Throughput Sequencing
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    Chapter 10 Characterization of DNA-Protein Interactions: Design and Analysis of ChIP-Seq Experiments
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    Chapter 11 PAR-CLIP: A Genomic Technique to Dissect RNA-Protein Interactions
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    Chapter 12 Metagenomic Design and Sequencing
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    Chapter 13 A Hitchhiker’s Guide to Metatranscriptomics
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    Chapter 14 Eukaryotic Single-Cell mRNA Sequencing
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    Chapter 15 Eukaryotic Single-Cell DNA Sequencing
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    Chapter 16 Submitting Data to a Public Repository, the Final Step of a Successful HTS Experiment
Attention for Chapter 7: Analysis of Long Noncoding RNAs in RNA-Seq Data
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