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Protein Structure Prediction

Overview of attention for book
Cover of 'Protein Structure Prediction'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Structural Modeling and Ligand-Binding Prediction for Analysis of Structure-Unknown and Function-Unknown Proteins Using FORTE Alignment and PoSSuM Pocket Search
  3. Altmetric Badge
    Chapter 2 The MULTICOM Protein Structure Prediction Server Empowered by Deep Learning and Contact Distance Prediction
  4. Altmetric Badge
    Chapter 3 The Genome3D Consortium for Structural Annotations of Selected Model Organisms
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    Chapter 4 Estimating the Quality of 3D Protein Models Using the ModFOLD7 Server
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    Chapter 5 Prediction of Intrinsic Disorder with Quality Assessment Using QUARTER
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    Chapter 6 Modeling of Three-Dimensional RNA Structures Using SimRNA
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    Chapter 7 Modeling Protein Homo-Oligomer Structures with GalaxyHomomer Web Server
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    Chapter 8 Template-Based Modeling of Protein Complexes Using the PPI3D Web Server
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    Chapter 9 Protein–Protein and Protein–Peptide Docking with ClusPro Server
  11. Altmetric Badge
    Chapter 10 Modeling of Protein Complexes and Molecular Assemblies with pyDock
  12. Altmetric Badge
    Chapter 11 A Guide for Protein–Protein Docking Using SwarmDock
  13. Altmetric Badge
    Chapter 12 Modeling Protein–Protein or Protein–DNA/RNA Complexes Using the HDOCK Webserver
  14. Altmetric Badge
    Chapter 13 IDP-LZerD: Software for Modeling Disordered Protein Interactions
  15. Altmetric Badge
    Chapter 14 AnAnaS: Software for Analytical Analysis of Symmetries in Protein Structures
  16. Altmetric Badge
    Chapter 15 MDockPeP: A Web Server for Blind Prediction of Protein–Peptide Complex Structures
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    Chapter 16 Protocols for All-Atom Reconstruction and High-Resolution Refinement of Protein–Peptide Complex Structures
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    Chapter 17 Dockground Tool for Development and Benchmarking of Protein Docking Procedures
  19. Altmetric Badge
    Chapter 18 Molecular Dynamics Flexible Fitting: All You Want to Know About Resolution Exchange
  20. Altmetric Badge
    Chapter 19 Protein Structure Modeling from Cryo-EM Map Using MAINMAST and MAINMAST-GUI Plugin
  21. Altmetric Badge
    Chapter 20 Protocols for Fast Simulations of Protein Structure Flexibility Using CABS-Flex and SURPASS
Attention for Chapter 10: Modeling of Protein Complexes and Molecular Assemblies with pyDock
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  • Good Attention Score compared to outputs of the same age and source (70th percentile)

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Chapter title
Modeling of Protein Complexes and Molecular Assemblies with pyDock
Chapter number 10
Book title
Protein Structure Prediction
Published in
Methods in molecular biology, July 2020
DOI 10.1007/978-1-0716-0708-4_10
Pubmed ID
Book ISBNs
978-1-07-160707-7, 978-1-07-160708-4
Authors

Mireia Rosell, Luis Angel Rodríguez-Lumbreras, Juan Fernández-Recio, Rosell, Mireia, Rodríguez-Lumbreras, Luis Angel, Fernández-Recio, Juan

X Demographics

X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 13 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 13 100%

Demographic breakdown

Readers by professional status Count As %
Student > Master 3 23%
Researcher 2 15%
Student > Bachelor 2 15%
Unspecified 1 8%
Student > Ph. D. Student 1 8%
Other 1 8%
Unknown 3 23%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 4 31%
Agricultural and Biological Sciences 2 15%
Unspecified 1 8%
Physics and Astronomy 1 8%
Medicine and Dentistry 1 8%
Other 1 8%
Unknown 3 23%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 10 August 2020.
All research outputs
#13,996,382
of 23,220,133 outputs
Outputs from Methods in molecular biology
#3,945
of 13,308 outputs
Outputs of similar age
#208,214
of 397,631 outputs
Outputs of similar age from Methods in molecular biology
#42
of 146 outputs
Altmetric has tracked 23,220,133 research outputs across all sources so far. This one is in the 38th percentile – i.e., 38% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,308 research outputs from this source. They receive a mean Attention Score of 3.4. This one has gotten more attention than average, scoring higher than 69% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 397,631 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 46th percentile – i.e., 46% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 146 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 70% of its contemporaries.