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Plant Proteomics

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Cover of 'Plant Proteomics'

Table of Contents

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    Book Overview
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    Chapter 1 What Is New in (Plant) Proteomics Methods and Protocols: The 2015–2019 Quinquennium
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    Chapter 2 Multiple Biomolecule Isolation Protocol Compatible with Mass Spectrometry and Other High-Throughput Analyses in Microalgae
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    Chapter 3 Protein Interaction Networks: Functional and Statistical Approaches
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    Chapter 4 Specific Protein Database Creation from Transcriptomics Data in Nonmodel Species: Holm Oak ( Quercus ilex L.)
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    Chapter 5 Subcellular Proteomics in Conifers: Purification of Nuclei and Chloroplast Proteomes
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    Chapter 6 Apoplastic Fluid Preparation from Arabidopsis thaliana Leaves Upon Interaction with a Nonadapted Powdery Mildew Pathogen
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    Chapter 7 Shotgun Proteomics of Plant Plasma Membrane and Microdomain Proteins Using Nano-LC-MS/MS
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    Chapter 8 A Protocol for the Plasma Membrane Proteome Analysis of Rice Leaves
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    Chapter 9 Isolation, Purity Assessment, and Proteomic Analysis of Endoplasmic Reticulum
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    Chapter 10 Dimethyl Labeling-Based Quantitative Proteomics of Recalcitrant Cocoa Pod Tissue
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    Chapter 11 Quantitative Profiling of Protein Abundance and Phosphorylation State in Plant Tissues Using Tandem Mass Tags
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    Chapter 12 Optimizing Shotgun Proteomics Analysis for a Confident Protein Identification and Quantitation in Orphan Plant Species: The Case of Holm Oak ( Quercus ilex )
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    Chapter 13 Combining Targeted and Untargeted Data Acquisition to Enhance Quantitative Plant Proteomics Experiments
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    Chapter 14 A Phosphoproteomic Analysis Pipeline for Peels of Tropical Fruits
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    Chapter 15 Label-Free Quantitative Phosphoproteomics for Algae
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    Chapter 16 Targeted Quantification of Phosphopeptides by Parallel Reaction Monitoring (PRM)
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    Chapter 17 Enrichment of N -Linked Glycopeptides and Their Identification by Complementary Fragmentation Techniques
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    Chapter 18 High-Resolution Lysine Acetylome Profiling by Offline Fractionation and Immunoprecipitation
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    Chapter 19 A Versatile Workflow for the Identification of Protein–Protein Interactions Using GFP-Trap Beads and Mass Spectrometry-Based Label-Free Quantification
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    Chapter 20 In Vivo Cross-Linking to Analyze Transient Protein–Protein Interactions
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    Chapter 21 Proteome Analysis of 14-3-3 Targets in Tomato Fruit Tissues
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    Chapter 22 The Use of Proteomics in Search of Allele-Specific Proteins in (Allo)polyploid Crops
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    Chapter 23 Methods for Optimization of Protein Extraction and Proteogenomic Mapping in Sweet Potato
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    Chapter 24 In Silico Analysis of Class III Peroxidases: Hypothetical Structure, Ligand Binding Sites, Posttranslational Modifications, and Interaction with Substrates
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    Chapter 25 MALDI Mass Spectrometry Imaging of Peptides in Medicago truncatula Root Nodules
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    Chapter 26 Cystatin Activity–Based Protease Profiling to Select Protease Inhibitors Useful in Plant Protection
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    Chapter 27 A Pipeline for Metabolic Pathway Reconstruction in Plant Orphan Species
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    Chapter 28 Detection of Plant Low-Abundance Proteins by Means of Combinatorial Peptide Ligand Library Methods
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    Chapter 29 iTRAQ-Based Proteomic Analysis of Rice Grains
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Title
Plant Proteomics
Published by
Springer US, May 2020
DOI 10.1007/978-1-0716-0528-8
ISBNs
978-1-07-160527-1, 978-1-07-160528-8
Editors

Jorrin-Novo, Jesus V., Valledor, Luis, Castillejo, Mari Angeles, Rey, Maria-Dolores

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