↓ Skip to main content

Modeling Biomolecular Site Dynamics

Overview of attention for book
Cover of 'Modeling Biomolecular Site Dynamics'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 A Pycellerator Tutorial
  3. Altmetric Badge
    Chapter 2 Using RuleBuilder to Graphically Define and Visualize BioNetGen-Language Patterns and Reaction Rules
  4. Altmetric Badge
    Chapter 3 Strategy-Driven Exploration for Rule-Based Models of Biochemical Systems with Porgy
  5. Altmetric Badge
    Chapter 4 Using rxncon to Develop Rule-Based Models
  6. Altmetric Badge
    Chapter 5 Efficiently Encoding Complex Biochemical Models with the Multistate Model Builder (MSMB)
  7. Altmetric Badge
    Chapter 6 Multi-Level Modeling and Simulation of Cellular Systems: An Introduction to ML-Rules
  8. Altmetric Badge
    Chapter 7 Using Python for Spatially Resolved Modeling with Simmune
  9. Altmetric Badge
    Chapter 8 Rule-Based Modeling Using Wildcards in the Smoldyn Simulator
  10. Altmetric Badge
    Chapter 9 MCell-R: A Particle-Resolution Network-Free Spatial Modeling Framework
  11. Altmetric Badge
    Chapter 10 Spatial Rule-Based Simulations: The SRSim Software
  12. Altmetric Badge
    Chapter 11 CellOrganizer: Learning and Using Cell Geometries for Spatial Cell Simulations
  13. Altmetric Badge
    Chapter 12 Using Mechanistic Models for Analysis of Proteomic Data
  14. Altmetric Badge
    Chapter 13 Annotations for Rule-Based Models
  15. Altmetric Badge
    Chapter 14 Markov Chain Aggregation and Its Application to Rule-Based Modelling
  16. Altmetric Badge
    Chapter 15 In Silico Evolution of Signaling Networks Using Rule-Based Models: Bistable Response Dynamics
  17. Altmetric Badge
    Chapter 16 Recipes for Analysis of Molecular Networks Using the Data2Dynamics Modeling Environment
  18. Altmetric Badge
    Chapter 17 RKappa: Software for Analyzing Rule-Based Models
  19. Altmetric Badge
    Chapter 18 A Step-by-Step Guide to Using BioNetFit
Overall attention for this book and its chapters
Altmetric Badge

Mentioned by

twitter
8 X users
wikipedia
1 Wikipedia page

Citations

dimensions_citation
1 Dimensions
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Title
Modeling Biomolecular Site Dynamics
Published by
Springer New York, April 2019
DOI 10.1007/978-1-4939-9102-0
ISBNs
978-1-4939-9100-6, 978-1-4939-9102-0
Editors

Hlavacek, William S.

X Demographics

X Demographics

The data shown below were collected from the profiles of 8 X users who shared this research output. Click here to find out more about how the information was compiled.