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Computational Methods in Systems Biology

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Cover of 'Computational Methods in Systems Biology'

Table of Contents

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    Book Overview
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    Chapter 1 Estimation and Verification of Hybrid Heart Models for Personalised Medical and Wearable Devices
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    Chapter 2 A Genetically Modified Hoare Logic that Identifies the Parameters of a Gene Network
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    Chapter 3 SReach: A Probabilistic Bounded Delta-Reachability Analyzer for Stochastic Hybrid Systems
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    Chapter 4 Experimental Design for Inference over the A. thaliana Circadian Clock Network
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    Chapter 5 Efficient Stochastic Simulation of Systems with Multiple Time Scales via Statistical Abstraction
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    Chapter 6 Approximate Bayesian Computation for Stochastic Single-Cell Time-Lapse Data Using Multivariate Test Statistics
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    Chapter 7 Stochastic Analysis of Chemical Reaction Networks Using Linear Noise Approximation
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    Chapter 8 Adaptive Moment Closure for Parameter Inference of Biochemical Reaction Networks
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    Chapter 9 Inferring Executable Models from Formalized Experimental Evidence
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    Chapter 10 Symbolic Dynamics of Biochemical Pathways as Finite States Machines
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    Chapter 11 Feature Learning Using Stacked Autoencoders to Predict the Activity of Antimicrobial Peptides
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    Chapter 12 Structural Simplification of Chemical Reaction Networks Preserving Deterministic Semantics
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    Chapter 13 Automating the Development of Metabolic Network Models
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    Chapter 14 Qualitative Reasoning for Reaction Networks with Partial Kinetic Information
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    Chapter 15 Boolean Network Identification from Multiplex Time Series Data
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    Chapter 16 BioPSy : An SMT-based Tool for Guaranteed Parameter Set Synthesis of Biological Models
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    Chapter 17 Derivation of Qualitative Dynamical Models from Biochemical Networks
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    Chapter 18 Model-Based Investigation of the Effect of the Cell Cycle on the Circadian Clock Through Transcription Inhibition During Mitosis
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    Chapter 19 Analysis of a Post-translational Oscillator Using Process Algebra and Spatio-Temporal Logic
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    Chapter 20 Modeling of Resilience Properties in Oscillatory Biological Systems Using Parametric Time Petri Nets
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    Chapter 21 Parameter Synthesis by Parallel Coloured CTL Model Checking
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    Chapter 22 Analysing Cell Line Specific EGFR Signalling via Optimized Automata Based Model Checking
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    Chapter 23 OPINION PAPER Evolutionary Constraint-Based Formulation Requires New Bi-level Solving Techniques
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    Chapter 24 SBMLDock: Docker Driven Systems Biology Tool Development and Usage
Attention for Chapter 21: Parameter Synthesis by Parallel Coloured CTL Model Checking
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Chapter title
Parameter Synthesis by Parallel Coloured CTL Model Checking
Chapter number 21
Book title
Computational Methods in Systems Biology
Published by
Springer, Cham, September 2015
DOI 10.1007/978-3-319-23401-4_21
Book ISBNs
978-3-31-923400-7, 978-3-31-923401-4
Authors

Luboš Brim, Milan Češka, Martin Demko, Samuel Pastva, David Šafránek

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 10 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Portugal 1 10%
Unknown 9 90%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 3 30%
Student > Master 2 20%
Student > Bachelor 1 10%
Other 1 10%
Researcher 1 10%
Other 0 0%
Unknown 2 20%
Readers by discipline Count As %
Computer Science 7 70%
Engineering 1 10%
Unknown 2 20%