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Plant Pathogenic Fungi and Oomycetes

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Cover of 'Plant Pathogenic Fungi and Oomycetes'

Table of Contents

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    Book Overview
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    Chapter 1 Quantifying Re-association of a Facultative Endohyphal Bacterium with a Filamentous Fungus
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    Chapter 2 Characterizing Mycoviruses
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    Chapter 3 Analysis of Secondary Metabolites from Plant Endophytic Fungi
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    Chapter 4 Protocols for Investigating the Leaf Mycobiome Using High-Throughput DNA Sequencing
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    Chapter 5 Characterizing Small RNAs in Filamentous Fungi Using the Rice Blast Fungus, Magnaporthe oryzae , as an Example
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    Chapter 6 Plant Small RNAs Responsive to Fungal Pathogen Infection
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    Chapter 7 Sequential Phosphopeptide Enrichment for Phosphoproteome Analysis of Filamentous Fungi: A Test Case Using Magnaporthe oryzae
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    Chapter 8 Assays for MAP Kinase Activation in Magnaporthe oryzae and Other Plant Pathogenic Fungi
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    Chapter 9 Visualizing the Movement of Magnaporthe oryzae Effector Proteins in Rice Cells During Infection
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    Chapter 10 Illuminating Phytophthora Biology with Fluorescent Protein Tags
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    Chapter 11 Methods for Transient Gene Expression in Wild Relatives of Potato
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    Chapter 12 Host-Induced Gene Silencing (HIGS) for Elucidating Puccinia Gene Function in Wheat
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    Chapter 13 From Short Reads to Chromosome-Scale Genome Assemblies
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    Chapter 14 BLASTmap: A Shiny-Based Application to Visualize BLAST Results as Interactive Heat Maps and a Tool to Design Gene-Specific Baits for Bespoke Target Enrichment Sequencing
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    Chapter 15 A Computational Protocol to Analyze Metatranscriptomic Data Capturing Fungal–Host Interactions
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    Chapter 16 Application of the Cre/lox System to Construct Auxotrophic Markers for Quantitative Genetic Analyses in Fusarium graminearum
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    Chapter 17 Protocol of Phytophthora capsici Transformation Using the CRISPR-Cas9 System
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    Chapter 18 Generating Gene Silenced Mutants in Phytophthora sojae
Attention for Chapter 14: BLASTmap: A Shiny-Based Application to Visualize BLAST Results as Interactive Heat Maps and a Tool to Design Gene-Specific Baits for Bespoke Target Enrichment Sequencing
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