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Mendeley readers
| Chapter title |
HLA Typing from Short-Read Sequencing Data with OptiType
|
|---|---|
| Chapter number | 15 |
| Book title |
HLA Typing
|
| Published in |
Methods in molecular biology, January 2018
|
| DOI | 10.1007/978-1-4939-8546-3_15 |
| Pubmed ID | |
| Book ISBNs |
978-1-4939-8545-6, 978-1-4939-8546-3
|
| Authors |
András Szolek, Szolek, András |
| Abstract |
The established standards for HLA genotyping rely on targeted DNA sequencing techniques. However, the increasing abundance of short-read sequencing data has prompted a demand for computational tools capable of HLA typing from general purpose sequencing data as well. OptiType is a software that performs HLA typing from short-read DNA and RNA sequencing data, and this chapter guides the user through its installation and usage. |
Mendeley readers
The data shown below were compiled from readership statistics for 13 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| Unknown | 13 | 100% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Other | 3 | 23% |
| Researcher | 2 | 15% |
| Student > Master | 2 | 15% |
| Student > Bachelor | 1 | 8% |
| Lecturer | 1 | 8% |
| Other | 1 | 8% |
| Unknown | 3 | 23% |
| Readers by discipline | Count | As % |
|---|---|---|
| Computer Science | 2 | 15% |
| Medicine and Dentistry | 2 | 15% |
| Agricultural and Biological Sciences | 1 | 8% |
| Arts and Humanities | 1 | 8% |
| Immunology and Microbiology | 1 | 8% |
| Other | 1 | 8% |
| Unknown | 5 | 38% |