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Comparative Genomics

Overview of attention for book
Cover of 'Comparative Genomics'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Computational Prediction of Domain Interactions
  3. Altmetric Badge
    Chapter 1 Comparative Analysis and Visualization of Genomic Sequences Using VISTA Browser and Associated Computational Tools
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    Chapter 2 Domain Team
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    Chapter 2 Comparative Genomic Analysis Using the UCSC Genome Browser
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    Chapter 3 Inference of Gene Function Based on Gene Fusion Events
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    Chapter 3 Comparative Genome Analysis in the Integrated Microbial Genomes (IMG) System
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    Chapter 4 WebACT
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    Chapter 4 Pfam
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    Chapter 5 InterPro and InterProScan
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    Chapter 5 GenColors
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    Chapter 6 Gene Annotation and Pathway Mapping in KEGG
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    Chapter 6 Comparative Microbial Genome Visualization Using GenomeViz
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    Chapter 7 BugView
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    Chapter 7 Ortholog Detection Using the Reciprocal Smallest Distance Algorithm
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    Chapter 8 Finding Conserved Gene Order Across Multiple Genomes
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    Chapter 8 CGAS
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    Chapter 9 BLAST QuickStart
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    Chapter 9 Analysis of Genome Rearrangement by Block-Interchanges
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    Chapter 10 PSI-BLAST Tutorial
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    Chapter 10 Comparative Genomics
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    Chapter 11 Organizing and Updating Whole Genome BLAST Searches with ReHAB
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    Chapter 11 Visualization of Syntenic Relationships With SynBrowse
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    Chapter 12 Gecko and GhostFam
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    Chapter 12 Alignment of Genomic Sequences Using DIALIGN
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    Chapter 13 An Introduction to the Lagan Alignment Toolkit
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    Chapter 13 Genome-wide Copy Number Analysis on GeneChip ® Platform Using Copy Number Analyzer for Affymetrix GeneChip 2.0 Software
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    Chapter 14 Oligonucleotide Array Comparative Genomic Hybridization
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    Chapter 14 Aligning Multiple Whole Genomes with Mercator and MAVID
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    Chapter 15 Studying Bacterial Genome Dynamics Using Microarray-Based Comparative Genomic Hybridization
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    Chapter 15 Mulan
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    Chapter 16 Improving Pairwise Sequence Alignment between Distantly Related Proteins
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    Chapter 16 DNA Copy Number Data Analysis Using the CGHAnalyzer Software Suite
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    Chapter 17 Discovering Sequence Motifs
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    Chapter 17 Microarray-Based Approach for Genome-Wide Survey of Nucleotide Polymorphisms
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    Chapter 18 High-Throughput Genotyping of Single Nucleotide Polymorphisms with High Sensitivity
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    Chapter 18 Discovery of Conserved Motifs in Promoters of Orthologous Genes in Prokaryotes
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    Chapter 19 PhyME
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    Chapter 19 Single Nucleotide Polymorphism Mapping Array Assay
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    Chapter 20 Molecular inversion probe assay.
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    Chapter 20 Comparative Genomics-Based Orthologous Promoter Analysis Using the DoOP Database and the DoOPSearch Web Tool
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    Chapter 21 novoSNP3
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    Chapter 21 Discovery of Motifs in Promoters of Coregulated Genes
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    Chapter 22 Fastcompare
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    Chapter 22 Rapid Identification of Single Nucleotide Substitutions Using SeqDoC
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    Chapter 23 SNPHunter
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    Chapter 23 Phylogenetic Footprinting to Find Functional DNA Elements
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    Chapter 24 Identification of Disease Genes
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    Chapter 24 Detecting Regulatory Sites Using PhyloGibbs
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    Chapter 25 Using the Gibbs Motif Sampler for Phylogenetic Footprinting
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    Chapter 25 Variable Number Tandem Repeat Typing of Bacteria
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    Chapter 26 Web-Based Identification of Evolutionary Conserved DNA cis -Regulatory Elements
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    Chapter 26 Fluorescent Amplified Fragment Length Polymorphism Genotyping of Bacterial Species
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    Chapter 27 Exploring Conservation of Transcription Factor Binding Sites with CONREAL
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    Chapter 27 FLP-Mapping
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    Chapter 28 Computational and Statistical Methodologies for ORFeome Primary Structure Analysis
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    Chapter 29 Comparative Analysis of RNA Genes
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    Chapter 30 Efficient Annotation of Bacterial Genomes for Small, Noncoding RNAs Using the Integrative Computational Tool sRNAPredict2
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    Chapter 31 Methods for Multiple Alignment and Consensus Structure Prediction of RNAs Implemented in MARNA
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    Chapter 32 Comparative Genomics
  61. Altmetric Badge
    Chapter 33 RNA Consensus Structure Prediction With RNAalifold
Overall attention for this book and its chapters
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (94th percentile)
  • High Attention Score compared to outputs of the same age and source (85th percentile)

Mentioned by

blogs
1 blog
twitter
6 X users
wikipedia
4 Wikipedia pages

Citations

dimensions_citation
17 Dimensions

Readers on

mendeley
8 Mendeley
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Title
Comparative Genomics
Published by
Methods in molecular biology, January 2007
DOI 10.1007/978-1-59745-515-2
ISBNs
978-1-58829-693-1, 978-1-59745-514-5, 978-1-934115-37-4, 978-1-59745-515-2
Authors

Nicholas H. Bergman, Bergman H. Nicholas

Editors

Bergman, Nicholas H.

X Demographics

X Demographics

The data shown below were collected from the profiles of 6 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 8 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Australia 1 13%
Unknown 7 88%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 25%
Student > Ph. D. Student 2 25%
Student > Bachelor 1 13%
Student > Postgraduate 1 13%
Student > Doctoral Student 1 13%
Other 1 13%
Readers by discipline Count As %
Agricultural and Biological Sciences 4 50%
Biochemistry, Genetics and Molecular Biology 2 25%
Computer Science 1 13%
Unspecified 1 13%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 13. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 12 February 2023.
All research outputs
#2,673,868
of 25,161,628 outputs
Outputs from Methods in molecular biology
#467
of 14,125 outputs
Outputs of similar age
#9,409
of 170,224 outputs
Outputs of similar age from Methods in molecular biology
#8
of 48 outputs
Altmetric has tracked 25,161,628 research outputs across all sources so far. Compared to these this one has done well and is in the 89th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 14,125 research outputs from this source. They receive a mean Attention Score of 3.5. This one has done particularly well, scoring higher than 96% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 170,224 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 94% of its contemporaries.
We're also able to compare this research output to 48 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 85% of its contemporaries.