Chapter title |
Bio-Algorithmic Workflows for Standardized Synthetic Biology Constructs
|
---|---|
Book title |
Synthetic Biology
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Published in |
Methods in molecular biology, January 2018
|
DOI | 10.1007/978-1-4939-7795-6_20 |
Pubmed ID | |
Book ISBNs |
978-1-4939-7794-9, 978-1-4939-7795-6
|
Authors |
Goñi-Moreno, Angel, de Lorenzo, Víctor, Angel Goñi-Moreno, Víctor de Lorenzo |
Abstract |
A synthetic biology workflow covers the roadmap from conceptualization of a genetic device to its construction and measurement. It is composed of databases that provide DNA parts/plasmids, wet-lab methods , software tools to design circuits, simulation packages , and tools to analyze circuit performance. The interdisciplinary nature of such a workflow requires that experimental results and their in-silico counterparts proceed alongside, with constant feedback between them. We present an end-to-end use case for engineering a simple synthetic device, where information standards maintain coherence throughout the workflow. These are the Standard European Vector Architecture (SEVA), the Synthetic Biology Open Language (SBOL), and the Systems Biology Markup Language (SBML). |
X Demographics
Geographical breakdown
Country | Count | As % |
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Unknown | 4 | 100% |
Demographic breakdown
Type | Count | As % |
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Members of the public | 4 | 100% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
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Unknown | 16 | 100% |
Demographic breakdown
Readers by professional status | Count | As % |
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Researcher | 6 | 38% |
Student > Ph. D. Student | 4 | 25% |
Student > Bachelor | 1 | 6% |
Other | 1 | 6% |
Student > Doctoral Student | 1 | 6% |
Other | 1 | 6% |
Unknown | 2 | 13% |
Readers by discipline | Count | As % |
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Biochemistry, Genetics and Molecular Biology | 4 | 25% |
Agricultural and Biological Sciences | 4 | 25% |
Engineering | 2 | 13% |
Business, Management and Accounting | 1 | 6% |
Mathematics | 1 | 6% |
Other | 2 | 13% |
Unknown | 2 | 13% |