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The Nucleus

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Cover of 'The Nucleus'

Table of Contents

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    Book Overview
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    Chapter 1 The Intranuclear Environment
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    Chapter 2 Purification of Nuclei and Preparation of Nuclear Envelopes from Skeletal Muscle
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    Chapter 3 Isolation of Highly Purified Yeast Nuclei for Nuclease Mapping of Chromatin Structure
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    Chapter 4 Working with Oocyte Nuclei: Cytological Preparations of Active Chromatin and Nuclear Bodies from Amphibian Germinal Vesicles
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    Chapter 5 Preparation of Arabidopsis Nuclei and Nucleoli
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    Chapter 6 High-yield isolation and subcellular proteomic characterization of nuclear and subnuclear structures from trypanosomes.
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    Chapter 7 Methods for Studying the Nuclei and Chromosomes of Dinoflagellates
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    Chapter 8 Isolation of Nucleoli from Ehrlich Ascites Tumor Cells and Dynamics of Nascent RNA within Isolated Nucleoli
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    Chapter 9 Time-lapse Microscopy and Fluorescence Resonance Energy Transfer to Analyze the Dynamics and Interactions of Nucleolar Proteins in Living Cells
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    Chapter 10 Three-Dimensional Reconstruction of Nucleolar Components by Electron Microscope Tomography
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    Chapter 11 The Perinucleolar Compartment (PNC): Detection by Immunohistochemistry
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    Chapter 12 Isolation of the Constitutive Heterochromatin from Mouse Liver Nuclei
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    Chapter 13 Isolation of Pathology-Associated Intranuclear Inclusions
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    Chapter 14 The Nuclear Ubiquitin–Proteasome System: Visualization of Proteasomes, Protein Aggregates, and Proteolysis in the Cell Nucleus
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    Chapter 15 Multicolor 3D Fluorescence In Situ Hybridization for Imaging Interphase Chromosomes
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    Chapter 16 Fluorescent Transgenes to Study Interphase Chromosomes in Living Plants
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    Chapter 17 Analysis of Telomeres and Telomerase
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    Chapter 18 Combined Immunofluorescence, RNA Fluorescent In Situ Hybridization, and DNA Fluorescent In Situ Hybridization to Study Chromatin Changes, Transcriptional Activity, Nuclear Organization, and X-Chromosome Inactivation
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    Chapter 19 Analysis of the Mobility of DNA Double-Strand Break-Containing Chromosome Domains in Living Mammalian Cells
Attention for Chapter 10: Three-Dimensional Reconstruction of Nucleolar Components by Electron Microscope Tomography
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Chapter title
Three-Dimensional Reconstruction of Nucleolar Components by Electron Microscope Tomography
Chapter number 10
Book title
The Nucleus
Published in
Methods in molecular biology, January 2008
DOI 10.1007/978-1-59745-406-3_10
Pubmed ID
Book ISBNs
978-1-58829-977-2, 978-1-59745-406-3
Authors

Pavel Tchelidze, Hervé Kaplan, Adrien Beorchia, Marie-Françoise O’Donohue, Hélène Bobichon, Nathalie Lalun, Laurence Wortham, Dominique Ploton, Tchelidze, Pavel, Kaplan, Hervé, Beorchia, Adrien, O’Donohue, Marie-Françoise, Bobichon, Hélène, Lalun, Nathalie, Wortham, Laurence, Ploton, Dominique

Abstract

The nucleus is a complex volume constituted of numerous subcompartments in which specific functions take place due to a specific spatial organization of their molecular components. To understand how these molecules are spatially organized within these machineries, it is necessary to investigate their three-dimensional organization at high resolution. To reach this goal, electron tomography appears to be a method of choice; it can generate tomograms with a resolution of a few nanometers by using multiple projections of a tilted section several hundred to several thousand nanometers in thickness imaged by transmission electron microscopy (TEM).Specific identification of molecules of interest contained within such thick sections requires their specific immunocytochemical labelling using electron-dense markers. We recently demonstrated that electron tomography of proteins immunostained with nanogold particles before embedding, and subsequently amplified with silver, was very fruitful due to the inherently high spatial resolution of the medium-voltage scanning and transmission electron microscope (STEM). Here we describe this approach, which is very efficient for tracing the 3D organization of proteins within complex machineries by using antibodies raised against one of the proteins, or against GFP to analyse GFP-tagged proteins.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 11 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 11 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 2 18%
Researcher 2 18%
Lecturer 1 9%
Student > Master 1 9%
Other 1 9%
Other 0 0%
Unknown 4 36%
Readers by discipline Count As %
Agricultural and Biological Sciences 2 18%
Chemistry 2 18%
Physics and Astronomy 1 9%
Pharmacology, Toxicology and Pharmaceutical Science 1 9%
Medicine and Dentistry 1 9%
Other 1 9%
Unknown 3 27%