↓ Skip to main content

Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC)

Overview of attention for book
Cover of 'Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC)'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Fifteen Years of Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC)
  3. Altmetric Badge
    Chapter 2 Stable isotope labeling by amino acids applied to bacterial cell culture.
  4. Altmetric Badge
    Chapter 3 SILAC Labeling of Yeast for the Study of Membrane Protein Complexes
  5. Altmetric Badge
    Chapter 4 Whole Proteome Analysis of the Protozoan Parasite Trypanosoma brucei Using Stable Isotope Labeling by Amino Acids in Cell Culture and Mass Spectrometry
  6. Altmetric Badge
    Chapter 5 Stable Isotope Labeling by Amino Acids in Cultured Primary Neurons
  7. Altmetric Badge
    Chapter 6 SILAC and Alternatives in Studying Cellular Proteomes of Plants
  8. Altmetric Badge
    Chapter 7 In Vivo Stable Isotope Labeling by Amino Acids in Drosophila melanogaster.
  9. Altmetric Badge
    Chapter 8 Stable Isotope Labeling for Proteomic Analysis of Tissues in Mouse
  10. Altmetric Badge
    Chapter 9 Identification of Novel Protein Functions and Signaling Mechanisms by Genetics and Quantitative Phosphoproteomics in Caenorhabditis elegans
  11. Altmetric Badge
    Chapter 10 SILAC-Based Temporal Phosphoproteomics.
  12. Altmetric Badge
    Chapter 11 Global Ubiquitination Analysis by SILAC in Mammalian Cells
  13. Altmetric Badge
    Chapter 12 Quantifying In Vivo, Site-Specific Changes in Protein Methylation with SILAC.
  14. Altmetric Badge
    Chapter 13 Applying SILAC for the Differential Analysis of Protein Complexes.
  15. Altmetric Badge
    Chapter 14 Defining Dynamic Protein Interactions Using SILAC-Based Quantitative Mass Spectrometry.
  16. Altmetric Badge
    Chapter 15 Identifying Nuclear Protein–Protein Interactions Using GFP Affinity Purification and SILAC-Based Quantitative Mass Spectrometry
  17. Altmetric Badge
    Chapter 16 Analyzing the Protein Assembly and Dynamics of the Human Spliceosome with SILAC
  18. Altmetric Badge
    Chapter 17 Identification and Validation of Protein-Protein Interactions by Combining Co-immunoprecipitation, Antigen Competition, and Stable Isotope Labeling
  19. Altmetric Badge
    Chapter 18 Protein Correlation Profiling-SILAC to Study Protein-Protein Interactions
  20. Altmetric Badge
    Chapter 19 Autophagosomal Proteome Analysis by Protein Correlation Profiling-SILAC
  21. Altmetric Badge
    Chapter 20 Design and Application of Super-SILAC for Proteome Quantification.
  22. Altmetric Badge
    Chapter 21 Proteomics Meets Genetics: SILAC Labeling of Drosophila melanogaster Larvae and Cells for In Vivo Functional Studies.
  23. Altmetric Badge
    Chapter 22 Analysis of Secreted Proteins Using SILAC.
  24. Altmetric Badge
    Chapter 23 Identification of MicroRNA Targets by Pulsed SILAC
  25. Altmetric Badge
    Chapter 24 MaxQuant for In-Depth Analysis of Large SILAC Datasets.
Attention for Chapter 24: MaxQuant for In-Depth Analysis of Large SILAC Datasets.
Altmetric Badge

Mentioned by

twitter
1 X user

Citations

dimensions_citation
5 Dimensions

Readers on

mendeley
61 Mendeley
citeulike
2 CiteULike
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Chapter title
MaxQuant for In-Depth Analysis of Large SILAC Datasets.
Chapter number 24
Book title
Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC)
Published in
Methods in molecular biology, July 2014
DOI 10.1007/978-1-4939-1142-4_24
Pubmed ID
Book ISBNs
978-1-4939-1141-7, 978-1-4939-1142-4
Authors

Tyanova S, Mann M, Cox J, Stefka Tyanova, Matthias Mann, Jürgen Cox

Abstract

Proteomics experiments can generate very large volumes of data, in particular in situations where within one experimental design many samples are compared to each other, possibly in combination with pre-fractionation of samples prior to LC-MS analysis. Here we provide a step-by-step protocol explaining how the current MaxQuant version can be used to analyze large SILAC-labeling datasets in an efficient way.

X Demographics

X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 61 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 61 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 21 34%
Student > Ph. D. Student 9 15%
Student > Postgraduate 5 8%
Student > Bachelor 5 8%
Professor 4 7%
Other 9 15%
Unknown 8 13%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 24 39%
Agricultural and Biological Sciences 14 23%
Medicine and Dentistry 6 10%
Chemistry 4 7%
Computer Science 1 2%
Other 3 5%
Unknown 9 15%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 02 January 2015.
All research outputs
#20,248,338
of 22,776,824 outputs
Outputs from Methods in molecular biology
#9,866
of 13,092 outputs
Outputs of similar age
#193,380
of 229,503 outputs
Outputs of similar age from Methods in molecular biology
#35
of 70 outputs
Altmetric has tracked 22,776,824 research outputs across all sources so far. This one is in the 1st percentile – i.e., 1% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,092 research outputs from this source. They receive a mean Attention Score of 3.3. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 229,503 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 70 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.